Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               92-214
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               92-283
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               69, 165
               

               Conread position:
               93-214
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-224
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-227
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-265
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               66, 37
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 159
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 155
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-276
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-276
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-287
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-299
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               65, 120
               

               Conread position:
               93-300
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               93-324
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-387
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 107
               

               Conread position:
               93-397
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 75
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 64
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               93-401
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 115
               

               Conread position:
               93-426
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               93-459
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 171
               

               Conread position:
               94-266
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               95-245
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-267
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               95-268
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 85
               

               Conread position:
               96-213
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-243
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 131
               

               Conread position:
               96-269
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               96-285
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               24, 148
               

               Conread position:
               96-292
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               159
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               65, 133
               

               Conread position:
               96-297
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               97-293
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               97-396
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               64, 124
               

               Conread position:
               98-218
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               63, 82
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 128
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-285
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               101-244
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-267
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-312
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               103-279
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               103-438
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               105-267
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 33
               

               Conread position:
               144-275
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               148-269
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-277
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 112
               

               Conread position:
               151-275
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               102, 7
               

               Conread position:
               160-401
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               159, 110
               

               Conread position:
               212-403
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               213-401
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               74, 64
               
Show alignments to all cow chromosomes.