Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 92-214 |
| Cow position: | chr8:50288235-50288357 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 46 |
| Conread position: | 92-283 |
| Cow position: | chr8:49215127-49214930 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 165 |
| Conread position: | 93-214 |
| Cow position: | chr8:14928193-14928315 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-224 |
| Cow position: | chr8:44694503-44694371 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-227 |
| Cow position: | chr8:50930439-50930574 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-265 |
| Cow position: | chr8:11802511-11802339 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 93-266 |
| Cow position: | chr8:47661633-47661806 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-267 |
| Cow position: | chr8:25523097-25522917 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 38, 163 |
| Conread position: | 93-267 |
| Cow position: | chr8:50994477-50994303 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 158 |
| Conread position: | 93-267 |
| Cow position: | chr8:51667603-51667778 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-268 |
| Cow position: | chr8:5016873-5016698 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr8:11832390-11832214 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 93-268 |
| Cow position: | chr8:14591213-14591385 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 93-268 |
| Cow position: | chr8:23771326-23771152 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-268 |
| Cow position: | chr8:25408416-25408241 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 135 |
| Conread position: | 93-268 |
| Cow position: | chr8:32318865-32319032 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 93-268 |
| Cow position: | chr8:33589066-33588891 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr8:38391057-38390885 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 68, 36 |
| Conread position: | 93-268 |
| Cow position: | chr8:39195523-39195700 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 159 |
| Conread position: | 93-268 |
| Cow position: | chr8:42484604-42484429 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-270 |
| Cow position: | chr8:11822004-11821825 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-270 |
| Cow position: | chr8:24915650-24915824 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 93-270 |
| Cow position: | chr8:60061068-60060895 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 93-275 |
| Cow position: | chr8:2170686-2170870 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 93-275 |
| Cow position: | chr8:8229089-8229272 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-275 |
| Cow position: | chr8:10742939-10743121 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-275 |
| Cow position: | chr8:44243882-44244064 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-275 |
| Cow position: | chr8:46944222-46944410 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 93-276 |
| Cow position: | chr8:12449639-12449455 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-276 |
| Cow position: | chr8:17311711-17311527 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-283 |
| Cow position: | chr8:19051168-19050979 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-283 |
| Cow position: | chr8:19330427-19330239 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 62, 157 |
| Conread position: | 93-287 |
| Cow position: | chr8:4687087-4686894 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 156 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-299 |
| Cow position: | chr8:42419745-42419952 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 65, 120 |
| Conread position: | 93-300 |
| Cow position: | chr8:45160382-45160590 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 158 |
| Conread position: | 93-324 |
| Cow position: | chr8:3856323-3856557 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-387 |
| Cow position: | chr8:47081544-47081237 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 93-397 |
| Cow position: | chr8:42160726-42161030 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 75 |
| Conread position: | 93-399 |
| Cow position: | chr8:11969592-11969892 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 64 |
| Conread position: | 93-399 |
| Cow position: | chr8:38606506-38606819 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 93-399 |
| Cow position: | chr8:58186526-58186819 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 58 |
| Conread position: | 93-401 |
| Cow position: | chr8:61034327-61034641 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 115 |
| Conread position: | 93-426 |
| Cow position: | chr8:47673843-47673517 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 69, 83 |
| Conread position: | 93-459 |
| Cow position: | chr8:24419515-24419879 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 171 |
| Conread position: | 94-266 |
| Cow position: | chr8:9735931-9735758 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 95-245 |
| Cow position: | chr8:8556464-8556616 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 95-267 |
| Cow position: | chr8:37931774-37931600 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 95-268 |
| Cow position: | chr8:47885711-47885538 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 85 |
| Conread position: | 96-213 |
| Cow position: | chr8:8401427-8401545 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 96-243 |
| Cow position: | chr8:30487697-30487849 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-268 |
| Cow position: | chr8:36635856-36636027 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 62, 131 |
| Conread position: | 96-269 |
| Cow position: | chr8:1348548-1348726 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 11 |
| Conread position: | 96-285 |
| Cow position: | chr8:25775982-25776174 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 24, 148 |
| Conread position: | 96-292 |
| Cow position: | chr8:7161580-7161384 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 96-297 |
| Cow position: | chr8:12717651-12717449 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 21 |
| Conread position: | 97-293 |
| Cow position: | chr8:8911193-8910999 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 158 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 97-396 |
| Cow position: | chr8:45692471-45692763 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 64, 124 |
| Conread position: | 98-218 |
| Cow position: | chr8:22571630-22571751 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-245 |
| Cow position: | chr8:10749042-10748896 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 98-258 |
| Cow position: | chr8:27579077-27578921 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 98-266 |
| Cow position: | chr8:1153629-1153796 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 98-266 |
| Cow position: | chr8:1319724-1319556 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 98-266 |
| Cow position: | chr8:2886430-2886262 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-266 |
| Cow position: | chr8:8517903-8518072 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr8:32437404-32437569 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 98-266 |
| Cow position: | chr8:32631347-32631516 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr8:47069126-47069294 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 98-268 |
| Cow position: | chr8:6684127-6683956 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr8:15711736-15711907 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr8:45797635-45797806 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-285 |
| Cow position: | chr8:30891636-30891821 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 27 |
| Conread position: | 101-244 |
| Cow position: | chr8:6065091-6065235 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 102-267 |
| Cow position: | chr8:34348354-34348187 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 102-312 |
| Cow position: | chr8:33431083-33430864 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 103-279 |
| Cow position: | chr8:47074946-47074768 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 103-438 |
| Cow position: | chr8:46147917-46148255 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 105-267 |
| Cow position: | chr8:9275686-9275520 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 144-275 |
| Cow position: | chr8:59262254-59262384 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 148-269 |
| Cow position: | chr8:45316465-45316588 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 148-277 |
| Cow position: | chr8:27925954-27925826 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 151-275 |
| Cow position: | chr8:32931143-32931019 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 102, 7 |
| Conread position: | 160-401 |
| Cow position: | chr8:42468359-42468121 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 159, 110 |
| Conread position: | 212-403 |
| Cow position: | chr8:44694165-44693989 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 213-401 |
| Cow position: | chr8:44075993-44076192 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 74, 64 |
Show alignments to all cow chromosomes.