Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               23-379
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               91-318
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               92-318
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 71
               

               Conread position:
               93-212
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               93-265
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               143
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               65, 130
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               93-269
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 28
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-276
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 158
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 12
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-293
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               93-324
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               93-410
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               146, 64
               

               Conread position:
               93-459
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-460
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 288
               

               Conread position:
               95-215
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               95-258
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-214
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               96-267
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 20
               

               Conread position:
               96-268
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-275
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               96-399
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 62
               

               Conread position:
               96-400
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               96-419
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 110
               

               Conread position:
               96-435
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 292
               

               Conread position:
               97-449
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 290
               

               Conread position:
               98-215
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-242
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-248
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-265
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               101-245
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-248
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-267
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               105-266
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               110-283
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               51, 102
               

               Conread position:
               113-275
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               121-419
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               129-326
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               131-271
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               137-397
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               21, 238
               

               Conread position:
               139-459
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 113
               

               Conread position:
               141-265
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               110, 15
               

               Conread position:
               143-264
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               146-383
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               182, 12
               

               Conread position:
               157-267
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 55
               

               Conread position:
               210-399
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               77, 174
               

               Conread position:
               212-392
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               107, 167
               

               Conread position:
               213-423
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 101
               
Show alignments to all cow chromosomes.