Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 139-605 |
| Cow position: | chr11:33293712-33294183 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 146-465 |
| Cow position: | chr11:81282018-81281692 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 74, 107 |
| Conread position: | 149-435 |
| Cow position: | chr11:23586696-23586413 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 154-529 |
| Cow position: | chr11:52132769-52133141 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 131 |
| Conread position: | 154-621 |
| Cow position: | chr11:48272253-48271791 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 65 |
| Conread position: | 155-453 |
| Cow position: | chr11:57724773-57725069 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-469 |
| Cow position: | chr11:45872259-45872576 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 90, 66 |
| Conread position: | 155-524 |
| Cow position: | chr11:18588534-18588892 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 210, 65 |
| Conread position: | 155-539 |
| Cow position: | chr11:3780366-3780752 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 155-604 |
| Cow position: | chr11:48672764-48672316 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 73 |
| Conread position: | 155-605 |
| Cow position: | chr11:4732394-4731946 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 155-605 |
| Cow position: | chr11:77745200-77745657 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 33, 25 |
| Conread position: | 155-607 |
| Cow position: | chr11:29916593-29916153 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 305 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 62, 120 |
| Conread position: | 155-625 |
| Cow position: | chr11:35881962-35881498 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 319 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 156-605 |
| Cow position: | chr11:1849120-1849556 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 158-399 |
| Cow position: | chr11:34646638-34646402 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 205, 62 |
| Conread position: | 158-498 |
| Cow position: | chr11:11125712-11125376 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 147, 60 |
| Conread position: | 160-386 |
| Cow position: | chr11:30830567-30830792 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-444 |
| Cow position: | chr11:65762544-65762829 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 178 |
| Conread position: | 160-456 |
| Cow position: | chr11:15017103-15016802 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 199 |
| Conread position: | 160-497 |
| Cow position: | chr11:8828585-8828914 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 160-589 |
| Cow position: | chr11:69119340-69118922 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 63 |
| Conread position: | 160-604 |
| Cow position: | chr11:66733876-66733443 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 60 |
| Conread position: | 160-605 |
| Cow position: | chr11:10213517-10213949 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 68 |
| Conread position: | 160-605 |
| Cow position: | chr11:44032058-44031606 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 143 |
| Conread position: | 160-605 |
| Cow position: | chr11:50152767-50153210 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 160-621 |
| Cow position: | chr11:44636707-44637170 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 161-525 |
| Cow position: | chr11:16226746-16226392 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 161-589 |
| Cow position: | chr11:33349655-33350079 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 163-605 |
| Cow position: | chr11:59702530-59702091 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 65 |
| Conread position: | 164-468 |
| Cow position: | chr11:16342186-16342497 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 164-485 |
| Cow position: | chr11:15632511-15632829 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 80, 56 |
| Conread position: | 168-605 |
| Cow position: | chr11:35580299-35579861 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 61 |
| Conread position: | 234-514 |
| Cow position: | chr11:58102800-58103076 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 129, 66 |
| Conread position: | 243-621 |
| Cow position: | chr11:44036690-44036307 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 22 |
| Conread position: | 248-545 |
| Cow position: | chr11:56518346-56518643 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 254-610 |
| Cow position: | chr11:62709916-62710270 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 263-605 |
| Cow position: | chr11:41239324-41239665 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 12 |
Show alignments to all cow chromosomes.