Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 153-488 |
| Cow position: | chr13:55674294-55673962 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 67 |
| Conread position: | 155-435 |
| Cow position: | chr13:14771368-14771650 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 155-447 |
| Cow position: | chr13:61188449-61188736 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 162, 65 |
| Conread position: | 155-466 |
| Cow position: | chr13:5263365-5263065 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 208, 65 |
| Conread position: | 155-467 |
| Cow position: | chr13:7059378-7059696 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 66, 94 |
| Conread position: | 155-517 |
| Cow position: | chr13:19023932-19023567 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 155-524 |
| Cow position: | chr13:61047130-61047485 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 257 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 208, 65 |
| Conread position: | 155-604 |
| Cow position: | chr13:44626284-44626737 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 155-604 |
| Cow position: | chr13:58043544-58043987 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 65 |
| Conread position: | 155-605 |
| Cow position: | chr13:12045422-12044981 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 68 |
| Conread position: | 155-605 |
| Cow position: | chr13:20879908-20879477 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 65 |
| Conread position: | 155-621 |
| Cow position: | chr13:20606201-20605743 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 156-413 |
| Cow position: | chr13:20473765-20473520 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 205, 64 |
| Conread position: | 156-450 |
| Cow position: | chr13:9593422-9593711 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 105, 74 |
| Conread position: | 156-481 |
| Cow position: | chr13:55316274-55315953 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 156-493 |
| Cow position: | chr13:11460550-11460871 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 161, 64 |
| Conread position: | 156-603 |
| Cow position: | chr13:34941733-34941299 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 73 |
| Conread position: | 156-612 |
| Cow position: | chr13:31808438-31808879 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 58 |
| Conread position: | 158-485 |
| Cow position: | chr13:17114460-17114140 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 160-409 |
| Cow position: | chr13:15902945-15903180 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 203, 60 |
| Conread position: | 160-491 |
| Cow position: | chr13:23856132-23856461 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 57 |
| Conread position: | 160-497 |
| Cow position: | chr13:23478951-23479281 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 156, 60 |
| Conread position: | 160-509 |
| Cow position: | chr13:15233847-15234174 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 201, 68 |
| Conread position: | 160-557 |
| Cow position: | chr13:56148442-56148852 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 160-557 |
| Cow position: | chr13:56160525-56160115 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 160-576 |
| Cow position: | chr13:13320718-13321111 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 293 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 109, 71 |
| Conread position: | 160-584 |
| Cow position: | chr13:42113940-42114356 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-594 |
| Cow position: | chr13:15958535-15958966 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 160-604 |
| Cow position: | chr13:52057478-52057898 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 160-605 |
| Cow position: | chr13:31813797-31814225 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 160-605 |
| Cow position: | chr13:41806693-41807126 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 160-605 |
| Cow position: | chr13:52283833-52284269 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 52 |
| Conread position: | 160-627 |
| Cow position: | chr13:21176401-21175944 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 160-646 |
| Cow position: | chr13:38284057-38283582 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 58 |
| Conread position: | 160-649 |
| Cow position: | chr13:47007798-47007335 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 63 |
| Conread position: | 161-616 |
| Cow position: | chr13:46324867-46324419 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 106, 59 |
| Conread position: | 161-628 |
| Cow position: | chr13:20666464-20666005 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 167-605 |
| Cow position: | chr13:49804903-49805327 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 51 |
| Conread position: | 169-466 |
| Cow position: | chr13:17745173-17745459 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 95, 49 |
Show alignments to all cow chromosomes.