Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-557 |
| Cow position: | chr16:48956874-48956479 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 81 |
| Conread position: | 150-589 |
| Cow position: | chr16:32587279-32586843 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 93, 70 |
| Conread position: | 155-464 |
| Cow position: | chr16:39695413-39695711 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 208, 75 |
| Conread position: | 155-467 |
| Cow position: | chr16:10148352-10148045 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 155-470 |
| Cow position: | chr16:53048622-53048311 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-488 |
| Cow position: | chr16:35195543-35195868 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 155-574 |
| Cow position: | chr16:21450917-21450510 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-593 |
| Cow position: | chr16:44744063-44744512 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 155-605 |
| Cow position: | chr16:31978116-31978563 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 155-616 |
| Cow position: | chr16:54298538-54298093 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 65 |
| Conread position: | 155-621 |
| Cow position: | chr16:30290378-30289924 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 156-485 |
| Cow position: | chr16:26649560-26649888 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 64 |
| Conread position: | 156-605 |
| Cow position: | chr16:48340625-48341063 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 158-481 |
| Cow position: | chr16:9729262-9728953 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 186, 62 |
| Conread position: | 160-385 |
| Cow position: | chr16:17945586-17945364 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-432 |
| Cow position: | chr16:45678043-45677774 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-468 |
| Cow position: | chr16:25839685-25839380 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-497 |
| Cow position: | chr16:47518910-47518582 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 163, 60 |
| Conread position: | 160-513 |
| Cow position: | chr16:47820632-47820288 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 33 |
| Conread position: | 160-541 |
| Cow position: | chr16:37380335-37379959 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 102, 58 |
| Conread position: | 160-581 |
| Cow position: | chr16:37669672-37670093 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-586 |
| Cow position: | chr16:46752206-46752635 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 160-604 |
| Cow position: | chr16:31122185-31122629 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 160-605 |
| Cow position: | chr16:25170458-25170018 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 160-628 |
| Cow position: | chr16:52834823-52835270 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 161-492 |
| Cow position: | chr16:24023233-24023561 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 139, 59 |
| Conread position: | 161-527 |
| Cow position: | chr16:33054417-33054761 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 161-625 |
| Cow position: | chr16:11102757-11103232 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 163-605 |
| Cow position: | chr16:601008-600569 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 57 |
| Conread position: | 164-384 |
| Cow position: | chr16:12320282-12320065 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 202-470 |
| Cow position: | chr16:35168755-35168485 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 9, 28 |
| Conread position: | 231-600 |
| Cow position: | chr16:4145063-4144690 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 119 |
| Conread position: | 247-605 |
| Cow position: | chr16:48369969-48370321 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 248-604 |
| Cow position: | chr16:56912736-56913086 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 242 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 46, 59 |
| Conread position: | 352-635 |
| Cow position: | chr16:41064886-41065168 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 10, 97 |
Show alignments to all cow chromosomes.