Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 95-480 |
| Cow position: | chr17:38647245-38646859 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 276 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 57, 139 |
| Conread position: | 97-483 |
| Cow position: | chr17:1275691-1275307 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 154-530 |
| Cow position: | chr17:21114843-21115204 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 104, 66 |
| Conread position: | 154-594 |
| Cow position: | chr17:20022403-20022840 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 155-469 |
| Cow position: | chr17:24490651-24490323 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 127 |
| Conread position: | 155-581 |
| Cow position: | chr17:34079001-34079408 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 65 |
| Conread position: | 155-589 |
| Cow position: | chr17:43141599-43142038 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 155-603 |
| Cow position: | chr17:14050097-14050524 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 224, 65 |
| Conread position: | 155-604 |
| Cow position: | chr17:17180153-17179707 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 158-424 |
| Cow position: | chr17:31037270-31037532 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 160-424 |
| Cow position: | chr17:4968217-4967958 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 160-443 |
| Cow position: | chr17:24821966-24821695 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 201, 42 |
| Conread position: | 160-449 |
| Cow position: | chr17:32273582-32273861 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-457 |
| Cow position: | chr17:12536360-12536653 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 160-497 |
| Cow position: | chr17:24587729-24587392 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 68 |
| Conread position: | 160-536 |
| Cow position: | chr17:26818353-26818717 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 160-550 |
| Cow position: | chr17:5422964-5423356 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 160-570 |
| Cow position: | chr17:15664782-15664370 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 160-575 |
| Cow position: | chr17:25901305-25900895 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 160-604 |
| Cow position: | chr17:18490645-18490203 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 160-605 |
| Cow position: | chr17:24824347-24823930 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-605 |
| Cow position: | chr17:32138319-32138731 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 309 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 202, 60 |
| Conread position: | 160-621 |
| Cow position: | chr17:32989581-32989143 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 62 |
| Conread position: | 160-621 |
| Cow position: | chr17:32993519-32993963 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 62 |
| Conread position: | 161-436 |
| Cow position: | chr17:4105890-4106150 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 165, 59 |
| Conread position: | 161-469 |
| Cow position: | chr17:1256396-1256702 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 161-621 |
| Cow position: | chr17:33933641-33934096 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 61 |
| Conread position: | 164-498 |
| Cow position: | chr17:35126811-35126487 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 200, 66 |
| Conread position: | 182-494 |
| Cow position: | chr17:41289939-41290240 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 62, 46 |
| Conread position: | 189-494 |
| Cow position: | chr17:23246284-23245990 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 246-475 |
| Cow position: | chr17:44232691-44232924 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 50, 102 |
| Conread position: | 246-497 |
| Cow position: | chr17:5745230-5745469 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 248-488 |
| Cow position: | chr17:33926105-33926338 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 115, 69 |
| Conread position: | 255-497 |
| Cow position: | chr17:24761213-24761449 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 93 |
Show alignments to all cow chromosomes.