Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 154-486 |
| Cow position: | chr2:20947443-20947118 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 78, 123 |
| Conread position: | 155-452 |
| Cow position: | chr2:41145385-41145090 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 65 |
| Conread position: | 155-501 |
| Cow position: | chr2:47090832-47090499 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 155-566 |
| Cow position: | chr2:80242113-80242524 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 96 |
| Conread position: | 155-603 |
| Cow position: | chr2:14826346-14825912 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 65 |
| Conread position: | 155-604 |
| Cow position: | chr2:72528030-72527582 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 155-604 |
| Cow position: | chr2:80116167-80115749 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 303 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 155-616 |
| Cow position: | chr2:25283185-25282720 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 75 |
| Conread position: | 156-485 |
| Cow position: | chr2:21003243-21002933 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 91, 74 |
| Conread position: | 156-498 |
| Cow position: | chr2:24434211-24434552 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 156-604 |
| Cow position: | chr2:44191549-44191107 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 156-621 |
| Cow position: | chr2:70704327-70703869 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 64 |
| Conread position: | 157-485 |
| Cow position: | chr2:75600790-75600458 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 148, 71 |
| Conread position: | 157-570 |
| Cow position: | chr2:56350850-56351255 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 281 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 157-604 |
| Cow position: | chr2:53532744-53533179 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 63 |
| Conread position: | 160-456 |
| Cow position: | chr2:33531883-33532172 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 100, 70 |
| Conread position: | 160-470 |
| Cow position: | chr2:17114665-17114975 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 160-476 |
| Cow position: | chr2:82262311-82262624 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 112, 70 |
| Conread position: | 160-483 |
| Cow position: | chr2:39584514-39584199 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 67 |
| Conread position: | 160-484 |
| Cow position: | chr2:25597430-25597746 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-497 |
| Cow position: | chr2:13354741-13354409 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-497 |
| Cow position: | chr2:41248636-41248302 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 241 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 160-497 |
| Cow position: | chr2:46189031-46189356 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 160-543 |
| Cow position: | chr2:74260523-74260147 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 160-547 |
| Cow position: | chr2:46202327-46201956 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 160-571 |
| Cow position: | chr2:53650089-53649693 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-604 |
| Cow position: | chr2:69676466-69676908 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 58 |
| Conread position: | 160-605 |
| Cow position: | chr2:1352059-1352483 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 68 |
| Conread position: | 160-605 |
| Cow position: | chr2:19494279-19493830 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 160-605 |
| Cow position: | chr2:70945469-70945025 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 68 |
| Conread position: | 160-612 |
| Cow position: | chr2:44170624-44170179 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 160-612 |
| Cow position: | chr2:45912567-45913015 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-621 |
| Cow position: | chr2:14089858-14089390 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 60 |
| Conread position: | 160-621 |
| Cow position: | chr2:41452298-41451838 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 161-480 |
| Cow position: | chr2:46331127-46330807 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 99, 59 |
| Conread position: | 161-504 |
| Cow position: | chr2:57932801-57932459 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 193, 53 |
| Conread position: | 161-525 |
| Cow position: | chr2:45535530-45535176 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 59 |
| Conread position: | 162-605 |
| Cow position: | chr2:71800021-71800465 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 163-491 |
| Cow position: | chr2:36878156-36878478 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 234 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 93, 57 |
| Conread position: | 172-575 |
| Cow position: | chr2:24007476-24007092 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 230-498 |
| Cow position: | chr2:73094789-73095051 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 118 |
| Conread position: | 253-485 |
| Cow position: | chr2:80797645-80797421 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 205, 107 |
| Conread position: | 254-654 |
| Cow position: | chr2:24709369-24709765 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 8 |
| Conread position: | 304-485 |
| Cow position: | chr2:16632864-16632682 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 42 |
Show alignments to all cow chromosomes.