Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-421 |
| Cow position: | chr25:14720817-14720560 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 149-489 |
| Cow position: | chr25:19679428-19679081 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 248 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 73, 93 |
| Conread position: | 154-388 |
| Cow position: | chr25:26679294-26679065 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 74 |
| Conread position: | 154-456 |
| Cow position: | chr25:6961085-6961377 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 204, 66 |
| Conread position: | 154-512 |
| Cow position: | chr25:20348937-20348574 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 99 |
| Conread position: | 155-427 |
| Cow position: | chr25:17342525-17342251 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-491 |
| Cow position: | chr25:17566654-17566324 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 150, 68 |
| Conread position: | 155-559 |
| Cow position: | chr25:6803613-6803233 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 275 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 155-603 |
| Cow position: | chr25:18294247-18294690 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 156-603 |
| Cow position: | chr25:11661752-11662190 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 72 |
| Conread position: | 158-315 |
| Cow position: | chr25:9843240-9843085 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 147, 70 |
| Conread position: | 158-497 |
| Cow position: | chr25:5836893-5837235 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 158-621 |
| Cow position: | chr25:30279144-30279601 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 158-635 |
| Cow position: | chr25:8576758-8576291 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 90, 62 |
| Conread position: | 160-457 |
| Cow position: | chr25:10217987-10218279 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 160-485 |
| Cow position: | chr25:15254286-15254588 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 160-489 |
| Cow position: | chr25:35612251-35612562 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 294, 60 |
| Conread position: | 160-522 |
| Cow position: | chr25:6227097-6226747 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 256 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 108, 60 |
| Conread position: | 160-530 |
| Cow position: | chr25:16319078-16319428 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-548 |
| Cow position: | chr25:15714935-15714559 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 160-559 |
| Cow position: | chr25:36036717-36037121 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 160-583 |
| Cow position: | chr25:23829067-23829464 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 291 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 160-603 |
| Cow position: | chr25:18721058-18721471 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 68, 80 |
| Conread position: | 160-605 |
| Cow position: | chr25:11436745-11437179 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 60 |
| Conread position: | 160-617 |
| Cow position: | chr25:3145906-3145456 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 53 |
| Conread position: | 160-619 |
| Cow position: | chr25:33959190-33959650 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 161-605 |
| Cow position: | chr25:21191550-21191113 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 67 |
| Conread position: | 162-497 |
| Cow position: | chr25:20785526-20785852 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 143, 58 |
| Conread position: | 162-594 |
| Cow position: | chr25:35347963-35347537 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 21 |
| Conread position: | 247-620 |
| Cow position: | chr25:32191648-32191278 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 116, 75 |
| Conread position: | 251-518 |
| Cow position: | chr25:10365778-10366042 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 257-481 |
| Cow position: | chr25:4002770-4002543 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
Show alignments to all cow chromosomes.