Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-627 |
| Cow position: | chr29:36530940-36530465 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 79 |
| Conread position: | 154-604 |
| Cow position: | chr29:465331-465774 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 76 |
| Conread position: | 155-391 |
| Cow position: | chr29:31674700-31674465 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 73 |
| Conread position: | 155-429 |
| Cow position: | chr29:3100200-3100461 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 155-497 |
| Cow position: | chr29:21933054-21933381 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 189, 63 |
| Conread position: | 155-502 |
| Cow position: | chr29:23844905-23844544 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 155-508 |
| Cow position: | chr29:14501660-14501315 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 94, 75 |
| Conread position: | 155-604 |
| Cow position: | chr29:1306793-1307238 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 66 |
| Conread position: | 155-604 |
| Cow position: | chr29:21443271-21443719 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 155-621 |
| Cow position: | chr29:86944-87405 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 156-481 |
| Cow position: | chr29:1556997-1556680 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 149, 72 |
| Conread position: | 160-420 |
| Cow position: | chr29:44988728-44988972 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 205, 63 |
| Conread position: | 160-480 |
| Cow position: | chr29:11562675-11562363 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 297, 68 |
| Conread position: | 160-485 |
| Cow position: | chr29:8926399-8926715 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 96, 60 |
| Conread position: | 160-486 |
| Cow position: | chr29:17222475-17222151 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-489 |
| Cow position: | chr29:22613492-22613175 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 160-497 |
| Cow position: | chr29:12680218-12679886 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-498 |
| Cow position: | chr29:2984952-2984618 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 143, 17 |
| Conread position: | 160-498 |
| Cow position: | chr29:41530912-41530581 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-605 |
| Cow position: | chr29:17607480-17607040 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 62 |
| Conread position: | 160-612 |
| Cow position: | chr29:17409397-17408951 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 60 |
| Conread position: | 160-616 |
| Cow position: | chr29:15738278-15738732 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 161-605 |
| Cow position: | chr29:43328705-43328262 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 59 |
| Conread position: | 231-452 |
| Cow position: | chr29:39643170-39642954 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 130, 8 |
| Conread position: | 247-422 |
| Cow position: | chr29:32211079-32211252 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 22 |
| Conread position: | 247-468 |
| Cow position: | chr29:34744644-34744853 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 116, 6 |
| Conread position: | 369-611 |
| Cow position: | chr29:10451706-10451949 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 98, 0 |
Show alignments to all cow chromosomes.