Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-525 |
| Cow position: | chr3:67704597-67704218 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 99, 71 |
| Conread position: | 155-479 |
| Cow position: | chr3:45279511-45279185 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 155-497 |
| Cow position: | chr3:54049986-54050309 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 188, 91 |
| Conread position: | 155-512 |
| Cow position: | chr3:2216413-2216055 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 63 |
| Conread position: | 155-550 |
| Cow position: | chr3:48851925-48852304 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 135, 75 |
| Conread position: | 155-581 |
| Cow position: | chr3:31206921-31206499 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 65 |
| Conread position: | 155-586 |
| Cow position: | chr3:49460881-49461316 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 155-592 |
| Cow position: | chr3:11987374-11986946 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 65 |
| Conread position: | 155-604 |
| Cow position: | chr3:60933462-60933035 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 88, 66 |
| Conread position: | 155-604 |
| Cow position: | chr3:79220903-79220453 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 65 |
| Conread position: | 155-605 |
| Cow position: | chr3:15954040-15954474 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 65 |
| Conread position: | 155-616 |
| Cow position: | chr3:14465661-14466114 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 87 |
| Conread position: | 157-541 |
| Cow position: | chr3:78077228-78076858 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 62 |
| Conread position: | 159-492 |
| Cow position: | chr3:5374369-5374051 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 160-389 |
| Cow position: | chr3:20677802-20678020 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 145, 23 |
| Conread position: | 160-398 |
| Cow position: | chr3:23105322-23105560 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 160-456 |
| Cow position: | chr3:43233546-43233255 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-489 |
| Cow position: | chr3:66900693-66901024 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 102, 60 |
| Conread position: | 160-497 |
| Cow position: | chr3:58131036-58130710 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 94 |
| Conread position: | 160-498 |
| Cow position: | chr3:56059851-56059516 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 68 |
| Conread position: | 160-536 |
| Cow position: | chr3:58968863-58969222 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 211, 68 |
| Conread position: | 160-612 |
| Cow position: | chr3:57577737-57577296 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 68 |
| Conread position: | 160-621 |
| Cow position: | chr3:70565698-70566152 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 68 |
| Conread position: | 160-645 |
| Cow position: | chr3:15388259-15387766 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 98 |
| Conread position: | 164-477 |
| Cow position: | chr3:44932552-44932246 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 64 |
| Conread position: | 175-478 |
| Cow position: | chr3:84000641-84000341 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 193-621 |
| Cow position: | chr3:49793403-49792999 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 197-456 |
| Cow position: | chr3:25755027-25754788 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 232-489 |
| Cow position: | chr3:26681830-26682075 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 247-522 |
| Cow position: | chr3:78530491-78530227 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 116, 69 |
| Conread position: | 255-605 |
| Cow position: | chr3:38497893-38497546 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 244, 75 |
| Conread position: | 255-621 |
| Cow position: | chr3:15057660-15058023 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 281-605 |
| Cow position: | chr3:16004066-16004382 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 84, 24 |
Show alignments to all cow chromosomes.