Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-452 |
| Cow position: | chr5:50943056-50943349 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 206, 75 |
| Conread position: | 149-605 |
| Cow position: | chr5:9894022-9894473 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 79 |
| Conread position: | 149-605 |
| Cow position: | chr5:15363983-15363545 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 71 |
| Conread position: | 154-446 |
| Cow position: | chr5:57591784-57591501 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 155-541 |
| Cow position: | chr5:61576640-61576255 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 105, 65 |
| Conread position: | 155-604 |
| Cow position: | chr5:47704031-47704483 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 156-627 |
| Cow position: | chr5:62172506-62172034 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 64 |
| Conread position: | 157-456 |
| Cow position: | chr5:7044612-7044909 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 157-485 |
| Cow position: | chr5:36868830-36868516 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 63 |
| Conread position: | 160-456 |
| Cow position: | chr5:23168736-23169018 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 87, 60 |
| Conread position: | 160-456 |
| Cow position: | chr5:44446775-44447087 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 160-472 |
| Cow position: | chr5:26262589-26262890 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 203, 22 |
| Conread position: | 160-474 |
| Cow position: | chr5:62142766-62142452 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 178, 68 |
| Conread position: | 160-485 |
| Cow position: | chr5:30253831-30253516 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-485 |
| Cow position: | chr5:64137346-64137022 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 145, 60 |
| Conread position: | 160-518 |
| Cow position: | chr5:34050208-34049847 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 101, 60 |
| Conread position: | 160-526 |
| Cow position: | chr5:65601547-65601193 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 60 |
| Conread position: | 160-570 |
| Cow position: | chr5:65941160-65941566 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 160-571 |
| Cow position: | chr5:5110984-5111392 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 161-586 |
| Cow position: | chr5:74003546-74003975 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 156, 33 |
| Conread position: | 162-612 |
| Cow position: | chr5:58793519-58793969 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 163-605 |
| Cow position: | chr5:32696735-32697146 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 200, 65 |
| Conread position: | 165-556 |
| Cow position: | chr5:45170444-45170061 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 274 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 95, 55 |
| Conread position: | 165-621 |
| Cow position: | chr5:31144702-31145143 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 82, 55 |
| Conread position: | 167-604 |
| Cow position: | chr5:34638967-34638545 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 61 |
| Conread position: | 248-483 |
| Cow position: | chr5:8821009-8821239 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 115, 81 |
| Conread position: | 253-535 |
| Cow position: | chr5:12351792-12352061 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 256-605 |
| Cow position: | chr5:65932930-65933278 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 135 |
| Conread position: | 262-612 |
| Cow position: | chr5:54404899-54405249 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 111 |
| Conread position: | 298-628 |
| Cow position: | chr5:56443242-56442907 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 7, 167 |
Show alignments to all cow chromosomes.