Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-434 |
| Cow position: | chr6:15243370-15243088 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 93, 71 |
| Conread position: | 149-472 |
| Cow position: | chr6:528169-528478 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 149-511 |
| Cow position: | chr6:38207375-38207734 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 71 |
| Conread position: | 153-477 |
| Cow position: | chr6:31261105-31260780 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 161, 68 |
| Conread position: | 154-543 |
| Cow position: | chr6:54365218-54365596 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 267 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 155-468 |
| Cow position: | chr6:12091884-12092182 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 207, 65 |
| Conread position: | 155-625 |
| Cow position: | chr6:35842767-35842306 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 65 |
| Conread position: | 156-498 |
| Cow position: | chr6:24468288-24468620 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 147, 64 |
| Conread position: | 156-605 |
| Cow position: | chr6:28810890-28811330 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 77, 66 |
| Conread position: | 157-504 |
| Cow position: | chr6:130056-130398 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 157-519 |
| Cow position: | chr6:31535462-31535821 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 157-542 |
| Cow position: | chr6:48282099-48281723 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 269 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 66 |
| Conread position: | 158-424 |
| Cow position: | chr6:61608618-61608354 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 159-604 |
| Cow position: | chr6:1770094-1770528 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 7 |
| Conread position: | 160-404 |
| Cow position: | chr6:38640337-38640094 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 80, 68 |
| Conread position: | 160-478 |
| Cow position: | chr6:21231628-21231329 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 219, 70 |
| Conread position: | 160-485 |
| Cow position: | chr6:8966201-8965875 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 160-486 |
| Cow position: | chr6:17997216-17997531 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 135, 47 |
| Conread position: | 160-493 |
| Cow position: | chr6:46860063-46860390 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-497 |
| Cow position: | chr6:9452666-9452996 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 83, 68 |
| Conread position: | 160-497 |
| Cow position: | chr6:28976936-28977258 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 105, 70 |
| Conread position: | 160-498 |
| Cow position: | chr6:44194445-44194773 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 203, 60 |
| Conread position: | 160-507 |
| Cow position: | chr6:20097855-20098201 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 68 |
| Conread position: | 160-577 |
| Cow position: | chr6:15937751-15938171 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 289 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 160-589 |
| Cow position: | chr6:32122011-32121592 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-605 |
| Cow position: | chr6:2547359-2546909 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 184 |
| Conread position: | 160-605 |
| Cow position: | chr6:10105875-10106335 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-605 |
| Cow position: | chr6:26728428-26728861 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 68 |
| Conread position: | 160-621 |
| Cow position: | chr6:45690506-45690960 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 203, 68 |
| Conread position: | 161-498 |
| Cow position: | chr6:4383582-4383265 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 161-605 |
| Cow position: | chr6:52478308-52478777 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 163-607 |
| Cow position: | chr6:65871138-65870688 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 57 |
| Conread position: | 252-588 |
| Cow position: | chr6:16738037-16737703 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 93 |
| Conread position: | 255-485 |
| Cow position: | chr6:60442432-60442204 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 275-580 |
| Cow position: | chr6:21587424-21587731 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 28, 66 |
Show alignments to all cow chromosomes.