Cow genome map
| Conread name: | Lym2-sn57_H04.f |
| Conread position: | 149-489 |
| Cow position: | chrX:9201650-9201315 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 156, 79 |
| Conread position: | 154-527 |
| Cow position: | chrX:17726072-17725708 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 154-605 |
| Cow position: | chrX:31948838-31949278 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 66 |
| Conread position: | 155-487 |
| Cow position: | chrX:21642386-21642708 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-489 |
| Cow position: | chrX:6278402-6278738 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 104, 65 |
| Conread position: | 155-604 |
| Cow position: | chrX:1055285-1055740 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 123 |
| Conread position: | 155-604 |
| Cow position: | chrX:40826655-40827094 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 65 |
| Conread position: | 155-607 |
| Cow position: | chrX:11844145-11844587 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 156-466 |
| Cow position: | chrX:45846196-45845886 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 66, 60 |
| Conread position: | 156-621 |
| Cow position: | chrX:37232502-37232047 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 64 |
| Conread position: | 156-627 |
| Cow position: | chrX:42469846-42470308 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 160-398 |
| Cow position: | chrX:34314115-34313889 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 145, 70 |
| Conread position: | 160-407 |
| Cow position: | chrX:20584419-20584169 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 160-448 |
| Cow position: | chrX:31312120-31311835 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 105, 59 |
| Conread position: | 160-451 |
| Cow position: | chrX:33000996-33000710 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 97, 60 |
| Conread position: | 160-453 |
| Cow position: | chrX:40809784-40809491 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 89, 57 |
| Conread position: | 160-459 |
| Cow position: | chrX:29544786-29545081 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 160-471 |
| Cow position: | chrX:34411937-34411625 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 84, 68 |
| Conread position: | 160-546 |
| Cow position: | chrX:45414213-45414589 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 196, 68 |
| Conread position: | 160-571 |
| Cow position: | chrX:7646342-7645944 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 284 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 160-571 |
| Cow position: | chrX:33640066-33639654 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 160-588 |
| Cow position: | chrX:26493097-26492670 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 57 |
| Conread position: | 160-605 |
| Cow position: | chrX:9252072-9252522 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 68 |
| Conread position: | 160-605 |
| Cow position: | chrX:31436565-31436132 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 160-605 |
| Cow position: | chrX:33855128-33855588 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 314 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 60, 183 |
| Conread position: | 160-612 |
| Cow position: | chrX:878289-878724 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 60 |
| Conread position: | 161-442 |
| Cow position: | chrX:36068105-36067835 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 161-456 |
| Cow position: | chrX:1499755-1499471 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 21 |
| Conread position: | 161-477 |
| Cow position: | chrX:29601738-29602053 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 144, 59 |
| Conread position: | 161-496 |
| Cow position: | chrX:11938843-11939163 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 49, 71 |
| Conread position: | 231-495 |
| Cow position: | chrX:41166939-41167202 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 253-497 |
| Cow position: | chrX:9855299-9855060 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 260-612 |
| Cow position: | chrX:19019110-19019446 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 104 |
Show alignments to all cow chromosomes.