Cow genome map
| Conread name: | Lym2-sn61_H07.f |
| Conread position: | 73-241 |
| Cow position: | chr10:6665419-6665590 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 148 |
| Conread position: | 82-213 |
| Cow position: | chr10:4311300-4311167 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 83-241 |
| Cow position: | chr10:53076239-53076076 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 84-241 |
| Cow position: | chr10:39228270-39228110 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 130, 18 |
| Conread position: | 84-241 |
| Cow position: | chr10:53674949-53674788 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 85-196 |
| Cow position: | chr10:7089473-7089358 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 85-240 |
| Cow position: | chr10:47690509-47690351 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 87-240 |
| Cow position: | chr10:41676284-41676448 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 77 |
| Conread position: | 87-240 |
| Cow position: | chr10:61509816-61509980 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 87-241 |
| Cow position: | chr10:6384656-6384493 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 87-241 |
| Cow position: | chr10:25822123-25822282 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 87-241 |
| Cow position: | chr10:34661200-34661361 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 88-188 |
| Cow position: | chr10:51289374-51289269 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 88-196 |
| Cow position: | chr10:15425165-15425061 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 88-196 |
| Cow position: | chr10:54548632-54548524 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 88-206 |
| Cow position: | chr10:4109708-4109590 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 29, 41 |
| Conread position: | 88-206 |
| Cow position: | chr10:64285670-64285793 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 88-213 |
| Cow position: | chr10:37708896-37709022 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 88-222 |
| Cow position: | chr10:58149040-58149184 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 88-241 |
| Cow position: | chr10:9656395-9656560 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 90-195 |
| Cow position: | chr10:15871753-15871860 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 90-213 |
| Cow position: | chr10:17448078-17448204 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 93-240 |
| Cow position: | chr10:16944589-16944435 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 97-213 |
| Cow position: | chr10:65359814-65359698 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-213 |
| Cow position: | chr10:47159324-47159209 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-240 |
| Cow position: | chr10:37426024-37426170 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 98-241 |
| Cow position: | chr10:17149994-17149842 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 102-206 |
| Cow position: | chr10:39258389-39258493 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 102-213 |
| Cow position: | chr10:9578853-9578964 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-238 |
| Cow position: | chr10:15868357-15868217 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 102-240 |
| Cow position: | chr10:48316842-48316983 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 103-222 |
| Cow position: | chr10:48377294-48377412 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 109-195 |
| Cow position: | chr10:31265956-31266042 (view UCSC Genome Browser custom track) |
| Alignm length: | 87 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-196 |
| Cow position: | chr10:33462287-33462374 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-213 |
| Cow position: | chr10:41760223-41760326 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 109-239 |
| Cow position: | chr10:4184294-4184160 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 109-239 |
| Cow position: | chr10:52278823-52278689 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 109-240 |
| Cow position: | chr10:23127888-23128023 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 109-240 |
| Cow position: | chr10:28395203-28395339 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 109-240 |
| Cow position: | chr10:50042701-50042571 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 109-240 |
| Cow position: | chr10:54848876-54848745 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 104, 108 |
| Conread position: | 109-241 |
| Cow position: | chr10:2857145-2857010 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 109-241 |
| Cow position: | chr10:21422063-21422194 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 34 |
| Conread position: | 109-241 |
| Cow position: | chr10:29252262-29252130 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 109-241 |
| Cow position: | chr10:37295574-37295710 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 110-241 |
| Cow position: | chr10:5151444-5151309 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 111-240 |
| Cow position: | chr10:34660146-34660279 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 111-241 |
| Cow position: | chr10:15817698-15817829 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 111-242 |
| Cow position: | chr10:30787532-30787661 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 113-213 |
| Cow position: | chr10:20485465-20485565 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-239 |
| Cow position: | chr10:49168940-49169071 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 114-201 |
| Cow position: | chr10:58736872-58736959 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 76 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 117-206 |
| Cow position: | chr10:30836946-30837035 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 77 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-241 |
| Cow position: | chr10:36002287-36002162 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 119-240 |
| Cow position: | chr10:49253451-49253330 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.