Cow genome map
Conread name: | Lym2-sn61_H07.f |
Conread position: | 81-240 |
Cow position: | chr17:9932108-9932272 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 7, 141 |
Conread position: | 83-195 |
Cow position: | chr17:35311721-35311607 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 31, 85 |
Conread position: | 87-195 |
Cow position: | chr17:42259400-42259292 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 87 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 87-213 |
Cow position: | chr17:5422882-5423010 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 87-239 |
Cow position: | chr17:33793352-33793195 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 30, 135 |
Conread position: | 87-241 |
Cow position: | chr17:1025638-1025798 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 22, 135 |
Conread position: | 87-241 |
Cow position: | chr17:21039752-21039584 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 131 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 87-241 |
Cow position: | chr17:40852163-40852000 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 123 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 87-242 |
Cow position: | chr17:39606621-39606456 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 88-183 |
Cow position: | chr17:38430441-38430537 (view UCSC Genome Browser custom track) |
Alignm length: | 97 |
Alignm identity: | 82 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 88-195 |
Cow position: | chr17:38736626-38736515 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 88-196 |
Cow position: | chr17:8153156-8153265 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 88 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 88-222 |
Cow position: | chr17:20234393-20234261 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 88-240 |
Cow position: | chr17:1469561-1469407 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 27, 96 |
Conread position: | 90-195 |
Cow position: | chr17:30108077-30107975 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 89 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 90-202 |
Cow position: | chr17:14004011-14003895 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 94 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 90-238 |
Cow position: | chr17:29245627-29245473 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 98-240 |
Cow position: | chr17:26789593-26789452 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 98-241 |
Cow position: | chr17:24862632-24862485 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 102-190 |
Cow position: | chr17:25193357-25193445 (view UCSC Genome Browser custom track) |
Alignm length: | 89 |
Alignm identity: | 76 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 102-197 |
Cow position: | chr17:25095653-25095556 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 102-206 |
Cow position: | chr17:10650282-10650179 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 86 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 102-240 |
Cow position: | chr17:40355428-40355286 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 102-240 |
Cow position: | chr17:43957830-43957688 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 102-241 |
Cow position: | chr17:17180213-17180076 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 102-243 |
Cow position: | chr17:11618754-11618613 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 122, 101 |
Conread position: | 106-241 |
Cow position: | chr17:31037211-31037350 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 107-241 |
Cow position: | chr17:25189450-25189316 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 119, 97 |
Conread position: | 109-196 |
Cow position: | chr17:12289246-12289333 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 78 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-206 |
Cow position: | chr17:5344780-5344683 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 81 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-220 |
Cow position: | chr17:34836334-34836223 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 90 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-222 |
Cow position: | chr17:969046-968934 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 92 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 109-222 |
Cow position: | chr17:35542007-35542120 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-223 |
Cow position: | chr17:22056865-22056979 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 89 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-223 |
Cow position: | chr17:27303806-27303921 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 92 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 109-239 |
Cow position: | chr17:9713179-9713313 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 109-239 |
Cow position: | chr17:20874558-20874425 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 110, 14 |
Conread position: | 109-240 |
Cow position: | chr17:37430342-37430477 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 109-241 |
Cow position: | chr17:29157579-29157446 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 90, 109 |
Conread position: | 109-241 |
Cow position: | chr17:32989639-32989504 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 106, 123 |
Conread position: | 109-241 |
Cow position: | chr17:32993461-32993596 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 106, 123 |
Conread position: | 109-243 |
Cow position: | chr17:32138262-32138399 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 100, 14 |
Conread position: | 110-240 |
Cow position: | chr17:8108196-8108326 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 102 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 92, 108 |
Conread position: | 111-240 |
Cow position: | chr17:9911918-9911788 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 96, 107 |
Conread position: | 111-241 |
Cow position: | chr17:17035110-17034976 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 113-195 |
Cow position: | chr17:21680938-21680856 (view UCSC Genome Browser custom track) |
Alignm length: | 83 |
Alignm identity: | 73 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 113-241 |
Cow position: | chr17:26072602-26072734 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 106, 0 |
Conread position: | 114-241 |
Cow position: | chr17:1634334-1634465 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 115-239 |
Cow position: | chr17:25467139-25467016 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 361-507 |
Cow position: | chr17:24824206-24824352 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 42, 55 |
Show alignments to all cow chromosomes.