Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 81-240
Cow position: chr17:9932108-9932272 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 141

Conread position: 83-195
Cow position: chr17:35311721-35311607 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 31, 85

Conread position: 87-195
Cow position: chr17:42259400-42259292 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 87-213
Cow position: chr17:5422882-5423010 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 87-239
Cow position: chr17:33793352-33793195 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 135

Conread position: 87-241
Cow position: chr17:1025638-1025798 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 22, 135

Conread position: 87-241
Cow position: chr17:21039752-21039584 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 87-241
Cow position: chr17:40852163-40852000 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 87-242
Cow position: chr17:39606621-39606456 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 88-183
Cow position: chr17:38430441-38430537 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 88-195
Cow position: chr17:38736626-38736515 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 88-196
Cow position: chr17:8153156-8153265 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 88-222
Cow position: chr17:20234393-20234261 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 88-240
Cow position: chr17:1469561-1469407 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 96

Conread position: 90-195
Cow position: chr17:30108077-30107975 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 89
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 90-202
Cow position: chr17:14004011-14003895 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-238
Cow position: chr17:29245627-29245473 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 98-240
Cow position: chr17:26789593-26789452 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 0

Conread position: 98-241
Cow position: chr17:24862632-24862485 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 102-190
Cow position: chr17:25193357-25193445 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 76
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-197
Cow position: chr17:25095653-25095556 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 102-206
Cow position: chr17:10650282-10650179 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 102-240
Cow position: chr17:40355428-40355286 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-240
Cow position: chr17:43957830-43957688 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 102-241
Cow position: chr17:17180213-17180076 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 102-243
Cow position: chr17:11618754-11618613 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 101

Conread position: 106-241
Cow position: chr17:31037211-31037350 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 107-241
Cow position: chr17:25189450-25189316 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 97

Conread position: 109-196
Cow position: chr17:12289246-12289333 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr17:5344780-5344683 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-220
Cow position: chr17:34836334-34836223 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr17:969046-968934 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 109-222
Cow position: chr17:35542007-35542120 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr17:22056865-22056979 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr17:27303806-27303921 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 109-239
Cow position: chr17:9713179-9713313 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 109-239
Cow position: chr17:20874558-20874425 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 109-240
Cow position: chr17:37430342-37430477 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr17:29157579-29157446 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 90, 109

Conread position: 109-241
Cow position: chr17:32989639-32989504 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 123

Conread position: 109-241
Cow position: chr17:32993461-32993596 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 123

Conread position: 109-243
Cow position: chr17:32138262-32138399 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 100, 14

Conread position: 110-240
Cow position: chr17:8108196-8108326 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 108

Conread position: 111-240
Cow position: chr17:9911918-9911788 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 96, 107

Conread position: 111-241
Cow position: chr17:17035110-17034976 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 113-195
Cow position: chr17:21680938-21680856 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 73
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-241
Cow position: chr17:26072602-26072734 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 114-241
Cow position: chr17:1634334-1634465 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 115-239
Cow position: chr17:25467139-25467016 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 361-507
Cow position: chr17:24824206-24824352 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 55

Show alignments to all cow chromosomes.