Cow genome map
Conread name: | Lym2-sn61_H07.f |
Conread position: | 61-241 |
Cow position: | chr18:47512147-47511959 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 62-228 |
Cow position: | chr18:53962292-53962456 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 121 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 31, 48 |
Conread position: | 68-241 |
Cow position: | chr18:49017629-49017458 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 19, 104 |
Conread position: | 74-196 |
Cow position: | chr18:38228537-38228409 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 83-241 |
Cow position: | chr18:33300015-33299857 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 125, 40 |
Conread position: | 83-243 |
Cow position: | chr18:15809685-15809849 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 36, 105 |
Conread position: | 83-243 |
Cow position: | chr18:52877474-52877312 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 124, 42 |
Conread position: | 85-241 |
Cow position: | chr18:49100261-49100415 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 107, 33 |
Conread position: | 87-196 |
Cow position: | chr18:44205967-44206082 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 93 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 87-213 |
Cow position: | chr18:14586357-14586485 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 87-240 |
Cow position: | chr18:30586114-30586267 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 126, 130 |
Conread position: | 87-241 |
Cow position: | chr18:44262745-44262584 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 88-194 |
Cow position: | chr18:36098479-36098370 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 89 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 88-206 |
Cow position: | chr18:51691345-51691470 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 88-213 |
Cow position: | chr18:33492472-33492345 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 88-239 |
Cow position: | chr18:20641380-20641541 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 88-240 |
Cow position: | chr18:42427737-42427574 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 26, 5 |
Conread position: | 88-240 |
Cow position: | chr18:50359446-50359286 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 88-241 |
Cow position: | chr18:18569099-18568956 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 88-243 |
Cow position: | chr18:19849650-19849802 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 125, 48 |
Conread position: | 90-240 |
Cow position: | chr18:10322915-10322760 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 90-243 |
Cow position: | chr18:48713661-48713502 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 93-241 |
Cow position: | chr18:23630499-23630651 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 22, 124 |
Conread position: | 98-213 |
Cow position: | chr18:5632368-5632253 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 94 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 98-213 |
Cow position: | chr18:24022718-24022603 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 91 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 98-235 |
Cow position: | chr18:12273758-12273617 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 98-240 |
Cow position: | chr18:24759556-24759702 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 98-241 |
Cow position: | chr18:1571137-1571282 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 107 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 98-241 |
Cow position: | chr18:49038562-49038415 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 99-222 |
Cow position: | chr18:39460319-39460196 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 100-238 |
Cow position: | chr18:5711555-5711694 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 104 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 124, 0 |
Conread position: | 100-241 |
Cow position: | chr18:18844114-18843967 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 110, 87 |
Conread position: | 102-222 |
Cow position: | chr18:23821736-23821856 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 102-224 |
Cow position: | chr18:5189597-5189720 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 102-240 |
Cow position: | chr18:7359841-7359699 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 105, 120 |
Conread position: | 102-241 |
Cow position: | chr18:35874174-35874033 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 102-270 |
Cow position: | chr18:23649019-23648854 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 121 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 16, 123 |
Conread position: | 108-213 |
Cow position: | chr18:52589878-52589982 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 86 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 109-193 |
Cow position: | chr18:2576611-2576695 (view UCSC Genome Browser custom track) |
Alignm length: | 85 |
Alignm identity: | 74 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-196 |
Cow position: | chr18:55123335-55123248 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 77 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-206 |
Cow position: | chr18:47410632-47410535 (view UCSC Genome Browser custom track) |
Alignm length: | 98 |
Alignm identity: | 82 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-213 |
Cow position: | chr18:19273007-19273111 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 88 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-217 |
Cow position: | chr18:24508142-24508252 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 90 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 109-222 |
Cow position: | chr18:56159550-56159438 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 90 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 109-240 |
Cow position: | chr18:3180500-3180365 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 109-240 |
Cow position: | chr18:16997343-16997208 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 109-240 |
Cow position: | chr18:37023461-37023596 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 109-240 |
Cow position: | chr18:51392554-51392685 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 109-241 |
Cow position: | chr18:21768702-21768573 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 109-241 |
Cow position: | chr18:38687169-38687037 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 94, 104 |
Conread position: | 109-241 |
Cow position: | chr18:44917848-44917710 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 109-266 |
Cow position: | chr18:11262925-11262769 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 90 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 110-238 |
Cow position: | chr18:4624062-4624191 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 110-240 |
Cow position: | chr18:27109204-27109338 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 110-241 |
Cow position: | chr18:28923761-28923894 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 107, 14 |
Conread position: | 111-241 |
Cow position: | chr18:19883620-19883485 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 111-241 |
Cow position: | chr18:46072550-46072416 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 102 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 113-240 |
Cow position: | chr18:30341099-30341226 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 98 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-206 |
Cow position: | chr18:27637576-27637484 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 81 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-240 |
Cow position: | chr18:1954505-1954635 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 114-240 |
Cow position: | chr18:52251773-52251903 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 114-241 |
Cow position: | chr18:50082173-50082304 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 84, 108 |
Conread position: | 114-245 |
Cow position: | chr18:12584755-12584890 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 115-271 |
Cow position: | chr18:11657739-11657581 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 102, 69 |
Conread position: | 346-503 |
Cow position: | chr18:47511880-47512038 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 8, 35 |
Show alignments to all cow chromosomes.