Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 71-214
Cow position: chr19:2042233-2042093 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 24, 7

Conread position: 83-213
Cow position: chr19:3217152-3217022 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 65

Conread position: 83-239
Cow position: chr19:15719477-15719640 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 156

Conread position: 83-240
Cow position: chr19:15091993-15092156 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 55

Conread position: 85-241
Cow position: chr19:18786186-18786346 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 87-239
Cow position: chr19:13325354-13325508 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 28

Conread position: 87-239
Cow position: chr19:25763250-25763091 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 137

Conread position: 87-241
Cow position: chr19:23756607-23756767 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr19:47671877-47671719 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 127, 0

Conread position: 88-196
Cow position: chr19:24224477-24224363 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr19:38597210-38597084 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-238
Cow position: chr19:37560065-37560215 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 129

Conread position: 89-241
Cow position: chr19:38500297-38500142 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 131

Conread position: 90-202
Cow position: chr19:18344413-18344525 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 90-213
Cow position: chr19:5522017-5522148 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 90-213
Cow position: chr19:29958547-29958671 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 28

Conread position: 90-239
Cow position: chr19:6532015-6531864 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 51

Conread position: 90-243
Cow position: chr19:24358116-24358268 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 102, 28

Conread position: 92-240
Cow position: chr19:25410715-25410866 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 128

Conread position: 93-214
Cow position: chr19:29115868-29115750 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 93-241
Cow position: chr19:39576436-39576593 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 98-240
Cow position: chr19:13121161-13121298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 98-240
Cow position: chr19:47986982-47986835 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 98-241
Cow position: chr19:23088106-23087959 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr19:43413904-43413756 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 97, 20

Conread position: 102-222
Cow position: chr19:14581480-14581361 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 102-240
Cow position: chr19:8185320-8185179 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 115, 12

Conread position: 106-241
Cow position: chr19:10930304-10930441 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 109-195
Cow position: chr19:30384982-30385068 (view UCSC Genome Browser custom track)
Alignm length: 87
Alignm identity: 75
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr19:18921131-18921235 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr19:43373150-43373046 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-214
Cow position: chr19:24637341-24637236 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr19:36845361-36845248 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr19:52356364-52356250 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 109-223
Cow position: chr19:15076089-15076205 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr19:2220964-2221099 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr19:2223992-2224120 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 109-240
Cow position: chr19:25526395-25526260 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr19:34459360-34459494 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 108, 130

Conread position: 109-241
Cow position: chr19:26269123-26269253 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr19:28447551-28447416 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 109-241
Cow position: chr19:34757891-34758027 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 110-209
Cow position: chr19:30886506-30886407 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-222
Cow position: chr19:31998163-31998275 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 110-223
Cow position: chr19:39254335-39254448 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 89
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-240
Cow position: chr19:23304381-23304512 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 113-213
Cow position: chr19:39781627-39781527 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-196
Cow position: chr19:34819080-34819162 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-238
Cow position: chr19:34166473-34166349 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 99, 103

Conread position: 114-240
Cow position: chr19:21817069-21816943 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 102, 83

Conread position: 114-241
Cow position: chr19:3621535-3621405 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 40

Conread position: 115-220
Cow position: chr19:52568370-52568475 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 119-240
Cow position: chr19:22798976-22799101 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 0

Show alignments to all cow chromosomes.