Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 82-196
Cow position: chr2:38576331-38576444 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 85-240
Cow position: chr2:8821378-8821220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 17

Conread position: 87-207
Cow position: chr2:35208065-35207940 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 87-239
Cow position: chr2:17114584-17114739 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 87-240
Cow position: chr2:15250323-15250170 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 134, 31

Conread position: 87-240
Cow position: chr2:42801191-42801028 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 87-241
Cow position: chr2:44065720-44065564 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 90

Conread position: 88-195
Cow position: chr2:12558389-12558494 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 88-213
Cow position: chr2:12686639-12686771 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-213
Cow position: chr2:38658639-38658768 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 88-240
Cow position: chr2:21049180-21049339 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 119

Conread position: 88-240
Cow position: chr2:80177443-80177599 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 97

Conread position: 88-241
Cow position: chr2:40257262-40257425 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 88-241
Cow position: chr2:63074709-63074865 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 132

Conread position: 88-243
Cow position: chr2:24530518-24530353 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 89-206
Cow position: chr2:16018092-16018206 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 89-241
Cow position: chr2:21410364-21410206 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 90-195
Cow position: chr2:4096443-4096548 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 90-196
Cow position: chr2:31123023-31122918 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 90-213
Cow position: chr2:39815143-39815265 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 90-240
Cow position: chr2:42183518-42183360 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 90-241
Cow position: chr2:38362224-38362378 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 127, 75

Conread position: 90-241
Cow position: chr2:43624387-43624547 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 93-240
Cow position: chr2:53500896-53501047 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 114, 128

Conread position: 95-240
Cow position: chr2:42255578-42255423 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 132

Conread position: 95-241
Cow position: chr2:63331667-63331817 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 13

Conread position: 97-213
Cow position: chr2:76110530-76110415 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 98-241
Cow position: chr2:17966895-17967040 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 98-241
Cow position: chr2:45542265-45542412 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 98-241
Cow position: chr2:46162091-46161944 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 99-238
Cow position: chr2:46120509-46120650 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 102-213
Cow position: chr2:46053600-46053489 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 102-215
Cow position: chr2:12186760-12186647 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-223
Cow position: chr2:36117379-36117258 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-226
Cow position: chr2:46300741-46300617 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr2:53575526-53575383 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 102-240
Cow position: chr2:57776477-57776335 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 102-241
Cow position: chr2:49716959-49717101 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 115, 45

Conread position: 102-241
Cow position: chr2:54700586-54700443 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 102-243
Cow position: chr2:36963652-36963512 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 102-244
Cow position: chr2:3739715-3739861 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 103-240
Cow position: chr2:28303448-28303307 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 105-241
Cow position: chr2:549203-549340 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 113

Conread position: 108-238
Cow position: chr2:69823714-69823579 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 108-240
Cow position: chr2:46971248-46971110 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 108-241
Cow position: chr2:41040586-41040719 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 109

Conread position: 108-243
Cow position: chr2:39263611-39263475 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 93

Conread position: 109-196
Cow position: chr2:68328730-68328817 (view UCSC Genome Browser custom track)
Alignm length: 88
Alignm identity: 78
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-197
Cow position: chr2:44313596-44313684 (view UCSC Genome Browser custom track)
Alignm length: 89
Alignm identity: 79
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 109-213
Cow position: chr2:37891368-37891472 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-217
Cow position: chr2:21950098-21949990 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 109-222
Cow position: chr2:39363125-39363012 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-227
Cow position: chr2:64465653-64465773 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-230
Cow position: chr2:29394886-29395007 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-236
Cow position: chr2:80963526-80963654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 109

Conread position: 109-239
Cow position: chr2:46188973-46189107 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 109-240
Cow position: chr2:40803124-40802992 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 108

Conread position: 109-240
Cow position: chr2:40880191-40880059 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 109

Conread position: 109-240
Cow position: chr2:44025500-44025368 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 106, 92

Conread position: 109-240
Cow position: chr2:45721144-45721279 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 109-240
Cow position: chr2:64773509-64773373 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 109-240
Cow position: chr2:68870814-68870682 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 109-241
Cow position: chr2:7194331-7194198 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 107, 92

Conread position: 109-241
Cow position: chr2:15219236-15219100 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 109-241
Cow position: chr2:22042664-22042523 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 101

Conread position: 109-241
Cow position: chr2:38640446-38640310 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr2:40466758-40466622 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-241
Cow position: chr2:71621925-71622060 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 96

Conread position: 109-241
Cow position: chr2:72183368-72183505 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 109-244
Cow position: chr2:61421045-61421183 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 133

Conread position: 110-217
Cow position: chr2:39350368-39350474 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 110-241
Cow position: chr2:45784861-45784724 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 111-194
Cow position: chr2:44022971-44023054 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-241
Cow position: chr2:19494336-19494201 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 111-241
Cow position: chr2:40488927-40488799 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 0

Conread position: 113-195
Cow position: chr2:7524013-7524095 (view UCSC Genome Browser custom track)
Alignm length: 83
Alignm identity: 74
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-239
Cow position: chr2:65932084-65931954 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 114-197
Cow position: chr2:5815901-5815984 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 75
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-213
Cow position: chr2:7478824-7478922 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 84
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 114-238
Cow position: chr2:46316988-46316862 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 114-241
Cow position: chr2:44222942-44222811 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 115-205
Cow position: chr2:78379301-78379392 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 81
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 115-222
Cow position: chr2:30954480-30954587 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 350-507
Cow position: chr2:45912721-45912562 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 129

Show alignments to all cow chromosomes.