Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 76-241
Cow position: chr28:2131764-2131933 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 27

Conread position: 85-239
Cow position: chr28:10588871-10589028 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 57

Conread position: 87-207
Cow position: chr28:3914865-3914746 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 87-213
Cow position: chr28:3678519-3678385 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 87-213
Cow position: chr28:4071121-4070992 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 80

Conread position: 87-213
Cow position: chr28:12991295-12991165 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 87-240
Cow position: chr28:1099517-1099668 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 87-241
Cow position: chr28:4013243-4013075 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr28:6975394-6975232 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 87-241
Cow position: chr28:7131931-7132096 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 141

Conread position: 87-241
Cow position: chr28:11585049-11585211 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 87-241
Cow position: chr28:22813408-22813253 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 130

Conread position: 88-195
Cow position: chr28:2279443-2279555 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 88-195
Cow position: chr28:24726281-24726396 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 88-196
Cow position: chr28:10053170-10053285 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 88-213
Cow position: chr28:3746356-3746225 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 88-213
Cow position: chr28:5674031-5673898 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 88-240
Cow position: chr28:11866509-11866673 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 90-213
Cow position: chr28:20046699-20046576 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 93

Conread position: 93-241
Cow position: chr28:8396484-8396326 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 95-240
Cow position: chr28:3143733-3143883 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 110

Conread position: 97-194
Cow position: chr28:2819914-2819817 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 97-239
Cow position: chr28:7267807-7267950 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 119, 104

Conread position: 98-183
Cow position: chr28:21263295-21263210 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 98-196
Cow position: chr28:23047756-23047658 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 98-216
Cow position: chr28:12933592-12933710 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-242
Cow position: chr28:5188289-5188439 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 98-244
Cow position: chr28:13090388-13090537 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 0

Conread position: 102-196
Cow position: chr28:16200609-16200703 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 82
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr28:11559498-11559609 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr28:3011136-3011276 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 86

Conread position: 102-241
Cow position: chr28:26982604-26982747 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 103-206
Cow position: chr28:117629-117733 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 103-206
Cow position: chr28:118743-118639 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 105-196
Cow position: chr28:3726079-3726169 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 105-206
Cow position: chr28:26269517-26269416 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr28:2743209-2743111 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 109-213
Cow position: chr28:29434301-29434405 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-223
Cow position: chr28:21355358-21355244 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 109-236
Cow position: chr28:30902253-30902122 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 109-238
Cow position: chr28:26826346-26826217 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 109-239
Cow position: chr28:32179820-32179690 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 116, 94

Conread position: 109-240
Cow position: chr28:20397244-20397378 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 9

Conread position: 109-241
Cow position: chr28:5204322-5204186 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr28:13048157-13048292 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 109-241
Cow position: chr28:17739949-17739816 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 105

Conread position: 109-245
Cow position: chr28:4307769-4307910 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 110-240
Cow position: chr28:10615820-10615954 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 110-240
Cow position: chr28:27161201-27161334 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 60

Conread position: 110-241
Cow position: chr28:2772836-2772704 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 47

Conread position: 111-222
Cow position: chr28:9418841-9418952 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 112-244
Cow position: chr28:7498023-7498158 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 131

Conread position: 113-240
Cow position: chr28:4881117-4881248 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 118-235
Cow position: chr28:5817960-5817843 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.