Cow genome map

Conread name: Lym2-sn61_H07.f

Conread position: 23-213
Cow position: chr3:4050385-4050187 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 96

Conread position: 67-239
Cow position: chr3:55984240-55984063 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 115

Conread position: 85-241
Cow position: chr3:68707889-68708046 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 133

Conread position: 87-213
Cow position: chr3:76922543-76922669 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 87-216
Cow position: chr3:9641686-9641558 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 39

Conread position: 87-240
Cow position: chr3:84250418-84250579 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 87-241
Cow position: chr3:22232536-22232688 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 14

Conread position: 87-241
Cow position: chr3:59604973-59604808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 87-241
Cow position: chr3:68616204-68616361 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 116

Conread position: 88-183
Cow position: chr3:43527664-43527760 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 83
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 88-205
Cow position: chr3:30180213-30180088 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 88-206
Cow position: chr3:11716111-11715998 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 88-213
Cow position: chr3:61133756-61133632 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 88-220
Cow position: chr3:70402768-70402631 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 93

Conread position: 88-240
Cow position: chr3:15153818-15153654 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 89-205
Cow position: chr3:72549-72431 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 89-209
Cow position: chr3:5365794-5365675 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 90-188
Cow position: chr3:16107244-16107348 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-193
Cow position: chr3:20802512-20802617 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 90-197
Cow position: chr3:59000635-59000746 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 99

Conread position: 90-201
Cow position: chr3:31804642-31804754 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 54

Conread position: 90-213
Cow position: chr3:19793028-19792899 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 78

Conread position: 90-213
Cow position: chr3:22092262-22092143 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 16

Conread position: 90-215
Cow position: chr3:54557794-54557666 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 90-238
Cow position: chr3:56948965-56949123 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr3:3985444-3985290 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 127

Conread position: 90-240
Cow position: chr3:20841752-20841910 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 90-240
Cow position: chr3:51233976-51234131 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 90-240
Cow position: chr3:71423438-71423588 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 139, 113

Conread position: 90-241
Cow position: chr3:82173943-82174097 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 125, 44

Conread position: 90-243
Cow position: chr3:7566293-7566457 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 92-241
Cow position: chr3:20677723-20677877 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 130

Conread position: 93-209
Cow position: chr3:18687026-18686904 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 93-213
Cow position: chr3:55712556-55712434 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 93-240
Cow position: chr3:15228708-15228860 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 93-240
Cow position: chr3:55177626-55177783 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 94-241
Cow position: chr3:55271934-55272083 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 8

Conread position: 98-223
Cow position: chr3:75050509-75050633 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 98-241
Cow position: chr3:41652484-41652338 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 117, 20

Conread position: 98-241
Cow position: chr3:44960896-44961042 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 130

Conread position: 98-241
Cow position: chr3:68004592-68004740 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 99-222
Cow position: chr3:76056177-76056300 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 102-213
Cow position: chr3:17058441-17058552 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 102-220
Cow position: chr3:83199615-83199498 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 102-222
Cow position: chr3:45314449-45314329 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 102-239
Cow position: chr3:75238562-75238421 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 102-240
Cow position: chr3:12711810-12711952 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 115, 0

Conread position: 102-241
Cow position: chr3:16752154-16752296 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 87

Conread position: 102-241
Cow position: chr3:66900628-66900771 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 104-240
Cow position: chr3:82366231-82366092 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 101

Conread position: 104-241
Cow position: chr3:49650492-49650350 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 107-196
Cow position: chr3:29234581-29234670 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-206
Cow position: chr3:11640831-11640734 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 81
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 109-239
Cow position: chr3:48900235-48900368 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 109-240
Cow position: chr3:15443631-15443765 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 109-240
Cow position: chr3:45211399-45211264 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 109-240
Cow position: chr3:54100628-54100763 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 109-240
Cow position: chr3:67959824-67959953 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 17

Conread position: 109-241
Cow position: chr3:22165318-22165453 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 109-241
Cow position: chr3:23408260-23408394 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 110

Conread position: 109-241
Cow position: chr3:59621550-59621686 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 109-247
Cow position: chr3:84137717-84137859 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 110-213
Cow position: chr3:62186248-62186145 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 110-239
Cow position: chr3:76267878-76268011 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 110-240
Cow position: chr3:17934840-17934975 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 110-240
Cow position: chr3:57760595-57760461 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 110-240
Cow position: chr3:74134801-74134667 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 110-241
Cow position: chr3:3738578-3738445 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 75, 105

Conread position: 112-207
Cow position: chr3:45308002-45307907 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 113-216
Cow position: chr3:53150425-53150322 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-213
Cow position: chr3:47199034-47199133 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 114-223
Cow position: chr3:53270923-53270814 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 115-240
Cow position: chr3:27976432-27976561 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 116-240
Cow position: chr3:71497047-71497175 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 121-240
Cow position: chr3:34669647-34669764 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 363-507
Cow position: chr3:56059709-56059856 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 363-508
Cow position: chr3:19626608-19626460 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 56

Show alignments to all cow chromosomes.