Cow genome map
| Conread name: | Lym2-sn61_H07.f |
| Conread position: | 29-218 |
| Cow position: | chr7:68774014-68773816 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 57-213 |
| Cow position: | chr7:5201466-5201617 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 65-241 |
| Cow position: | chr7:53785768-53785952 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 68-241 |
| Cow position: | chr7:14174222-14174395 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 58 |
| Conread position: | 74-241 |
| Cow position: | chr7:40263460-40263625 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 82-239 |
| Cow position: | chr7:20176520-20176674 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 83-238 |
| Cow position: | chr7:30931782-30931942 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 16 |
| Conread position: | 87-187 |
| Cow position: | chr7:38357452-38357554 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 87-188 |
| Cow position: | chr7:60247839-60247738 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 87-217 |
| Cow position: | chr7:30277516-30277389 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 87-239 |
| Cow position: | chr7:22793532-22793374 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 87-241 |
| Cow position: | chr7:9449469-9449621 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 125 |
| Conread position: | 87-241 |
| Cow position: | chr7:53382378-53382232 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 88-202 |
| Cow position: | chr7:14486260-14486146 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 88-240 |
| Cow position: | chr7:4129591-4129751 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 89-195 |
| Cow position: | chr7:43055403-43055508 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 90-175 |
| Cow position: | chr7:34224330-34224243 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 90-194 |
| Cow position: | chr7:40110743-40110849 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 90-206 |
| Cow position: | chr7:34464548-34464425 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 90-213 |
| Cow position: | chr7:59076029-59075910 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 90-223 |
| Cow position: | chr7:24220854-24220718 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 90-239 |
| Cow position: | chr7:19466064-19466220 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 57 |
| Conread position: | 90-240 |
| Cow position: | chr7:36248286-36248131 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 93-196 |
| Cow position: | chr7:31049408-31049515 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 98-195 |
| Cow position: | chr7:11946058-11945961 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-196 |
| Cow position: | chr7:44942734-44942634 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 98-213 |
| Cow position: | chr7:11884105-11884221 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 98-239 |
| Cow position: | chr7:32946244-32946098 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 98-240 |
| Cow position: | chr7:8089340-8089194 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 102-196 |
| Cow position: | chr7:25263539-25263445 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-197 |
| Cow position: | chr7:35754843-35754748 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-197 |
| Cow position: | chr7:41122096-41122191 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-213 |
| Cow position: | chr7:53996471-53996360 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-219 |
| Cow position: | chr7:27290328-27290445 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 102-241 |
| Cow position: | chr7:18388228-18388371 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 109-195 |
| Cow position: | chr7:11549828-11549741 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 109-197 |
| Cow position: | chr7:44596538-44596626 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-206 |
| Cow position: | chr7:26309505-26309602 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-216 |
| Cow position: | chr7:60121716-60121610 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 109-222 |
| Cow position: | chr7:40414833-40414946 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-222 |
| Cow position: | chr7:43450705-43450592 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-240 |
| Cow position: | chr7:9137002-9136867 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 109-240 |
| Cow position: | chr7:11015846-11015711 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 109-240 |
| Cow position: | chr7:36774532-36774397 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 109-240 |
| Cow position: | chr7:57258859-57258994 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 109-240 |
| Cow position: | chr7:68857424-68857557 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 109-241 |
| Cow position: | chr7:23936275-23936140 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 108, 130 |
| Conread position: | 109-241 |
| Cow position: | chr7:39947085-39947221 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 109-241 |
| Cow position: | chr7:40710292-40710155 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 110-206 |
| Cow position: | chr7:10795996-10795900 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-240 |
| Cow position: | chr7:2894889-2894756 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 110-240 |
| Cow position: | chr7:25393462-25393334 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 110-240 |
| Cow position: | chr7:29505278-29505144 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 110-240 |
| Cow position: | chr7:50166192-50166058 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 110-240 |
| Cow position: | chr7:53653146-53653012 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 110-241 |
| Cow position: | chr7:3256182-3256317 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 112-211 |
| Cow position: | chr7:50858114-50858015 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 290-507 |
| Cow position: | chr7:28544065-28544288 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 8, 37 |
Show alignments to all cow chromosomes.