Cow genome map
| Conread name: | Lym2-sn76_H05.f |
| Conread position: | 64-187 |
| Cow position: | chrX:40680725-40680848 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 66-183 |
| Cow position: | chrX:8759737-8759852 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 69-194 |
| Cow position: | chrX:42220584-42220461 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 69-235 |
| Cow position: | chrX:42506831-42506668 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 115 |
| Conread position: | 78-222 |
| Cow position: | chrX:35409878-35410015 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 91-225 |
| Cow position: | chrX:26850288-26850155 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 92-192 |
| Cow position: | chrX:876708-876609 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 92-192 |
| Cow position: | chrX:19161992-19161892 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 92-193 |
| Cow position: | chrX:42159080-42159180 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 92-203 |
| Cow position: | chrX:7950572-7950462 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 92-203 |
| Cow position: | chrX:23185199-23185089 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 92-205 |
| Cow position: | chrX:1938151-1938265 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 92-205 |
| Cow position: | chrX:33466762-33466872 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 92-205 |
| Cow position: | chrX:40337049-40337164 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 92-209 |
| Cow position: | chrX:3130781-3130899 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 92-209 |
| Cow position: | chrX:4328045-4327926 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 92-212 |
| Cow position: | chrX:51764-51645 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 93-194 |
| Cow position: | chrX:4399255-4399358 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 94-192 |
| Cow position: | chrX:34193940-34193842 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 95-202 |
| Cow position: | chrX:44040318-44040427 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 97-208 |
| Cow position: | chrX:22134878-22134767 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-194 |
| Cow position: | chrX:4632710-4632613 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 98-199 |
| Cow position: | chrX:19203201-19203099 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 98-203 |
| Cow position: | chrX:11674256-11674362 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 98-205 |
| Cow position: | chrX:8642189-8642295 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 98-215 |
| Cow position: | chrX:41941768-41941884 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 98-252 |
| Cow position: | chrX:755087-755241 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 99-192 |
| Cow position: | chrX:27508879-27508786 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-200 |
| Cow position: | chrX:27442393-27442292 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 99-206 |
| Cow position: | chrX:29723896-29724001 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 100-205 |
| Cow position: | chrX:40451922-40451816 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 100-218 |
| Cow position: | chrX:22283985-22284104 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 0 |
Show alignments to all cow chromosomes.