Cow genome map
| Conread name: | Mixc-0029c19 |
| Conread position: | 11-119 |
| Cow position: | chr5:49501835-49501727 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-119 |
| Cow position: | chr5:67212350-67212458 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 11-122 |
| Cow position: | chr5:16938031-16937921 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 12-117 |
| Cow position: | chr5:15479116-15479221 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-119 |
| Cow position: | chr5:4710160-4710055 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 12-119 |
| Cow position: | chr5:30949925-30949818 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-119 |
| Cow position: | chr5:43992314-43992421 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-119 |
| Cow position: | chr5:58555126-58555234 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-119 |
| Cow position: | chr5:58793618-58793510 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 12-120 |
| Cow position: | chr5:31918630-31918740 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 86 |
| Conread position: | 12-123 |
| Cow position: | chr5:61914554-61914665 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 13-117 |
| Cow position: | chr5:5257296-5257193 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 13-117 |
| Cow position: | chr5:23678708-23678607 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 13-119 |
| Cow position: | chr5:41165079-41165185 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-119 |
| Cow position: | chr5:52645089-52644983 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-119 |
| Cow position: | chr5:57101532-57101426 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 7, 64 |
| Conread position: | 13-120 |
| Cow position: | chr5:56613573-56613466 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-119 |
| Cow position: | chr5:4267662-4267767 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-119 |
| Cow position: | chr5:39258498-39258602 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 14-119 |
| Cow position: | chr5:45574373-45574268 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-119 |
| Cow position: | chr5:62142667-62142773 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 15-114 |
| Cow position: | chr5:50575777-50575876 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-117 |
| Cow position: | chr5:43844669-43844568 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 17-117 |
| Cow position: | chr5:44796739-44796638 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 19-116 |
| Cow position: | chr5:5855855-5855952 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-114 |
| Cow position: | chr5:9090025-9089931 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 80 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:29828044-29828144 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:37808665-37808566 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:39447537-39447438 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:49474547-49474448 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:52165179-52165081 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 20-119 |
| Cow position: | chr5:58446805-58446904 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-118 |
| Cow position: | chr5:35969532-35969628 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 21-119 |
| Cow position: | chr5:11668187-11668088 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 21-119 |
| Cow position: | chr5:55795968-55795869 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 22-121 |
| Cow position: | chr5:50101376-50101275 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 24-119 |
| Cow position: | chr5:63987443-63987349 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 88-228 |
| Cow position: | chr5:55767799-55767940 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
Show alignments to all cow chromosomes.