Cow genome map
| Conread name: | Mixc-0029c19 |
| Conread position: | 2-116 |
| Cow position: | chrX:35278311-35278424 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 9-117 |
| Cow position: | chrX:21327899-21328009 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 11-124 |
| Cow position: | chrX:32910094-32910207 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-113 |
| Cow position: | chrX:20743595-20743696 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-117 |
| Cow position: | chrX:37910435-37910541 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 12-119 |
| Cow position: | chrX:34502908-34503018 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 12-119 |
| Cow position: | chrX:38218705-38218812 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-119 |
| Cow position: | chrX:878388-878282 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-119 |
| Cow position: | chrX:27680390-27680496 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-119 |
| Cow position: | chrX:42855450-42855556 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-117 |
| Cow position: | chrX:42492530-42492427 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-117 |
| Cow position: | chrX:42893916-42894022 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 14-119 |
| Cow position: | chrX:11717791-11717685 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-119 |
| Cow position: | chrX:23514022-23513919 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 14-119 |
| Cow position: | chrX:27394033-27393928 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 14-120 |
| Cow position: | chrX:11763007-11762902 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-140 |
| Cow position: | chrX:23561849-23561977 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 15-117 |
| Cow position: | chrX:29733598-29733496 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 15-119 |
| Cow position: | chrX:11082629-11082524 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 16-117 |
| Cow position: | chrX:27511422-27511524 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 16-117 |
| Cow position: | chrX:40680608-40680710 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 16-117 |
| Cow position: | chrX:42450019-42449918 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-119 |
| Cow position: | chrX:41068720-41068823 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-119 |
| Cow position: | chrX:11656077-11656179 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 18-119 |
| Cow position: | chrX:39180237-39180135 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 84 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 19-117 |
| Cow position: | chrX:7277909-7278007 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 82 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-117 |
| Cow position: | chrX:31515171-31515270 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 20-110 |
| Cow position: | chrX:1572140-1572050 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 78 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-117 |
| Cow position: | chrX:29680262-29680165 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-117 |
| Cow position: | chrX:38964107-38964204 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chrX:5872316-5872415 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chrX:25411906-25412005 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chrX:27075052-27074953 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chrX:29553284-29553383 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 20-119 |
| Cow position: | chrX:29601829-29601730 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-117 |
| Cow position: | chrX:3806682-3806778 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-119 |
| Cow position: | chrX:25788905-25788807 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 81 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-117 |
| Cow position: | chrX:161413-161508 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-119 |
| Cow position: | chrX:6213871-6213968 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-119 |
| Cow position: | chrX:19943233-19943138 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 83 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 22-119 |
| Cow position: | chrX:22624477-22624574 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 23-117 |
| Cow position: | chrX:31294570-31294476 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-117 |
| Cow position: | chrX:6690257-6690164 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 80 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-115 |
| Cow position: | chrX:23562636-23562726 (view UCSC Genome Browser custom track) |
| Alignm length: | 91 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 26-117 |
| Cow position: | chrX:22915035-22914944 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 79 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 27-119 |
| Cow position: | chrX:37665697-37665789 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 81 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-119 |
| Cow position: | chrX:23266429-23266513 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 75 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-250 |
| Cow position: | chrX:35982088-35981956 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
Show alignments to all cow chromosomes.