Cow genome map
| Conread name: | OvF6-UMC-p6mm1-003-d08 |
| Conread position: | 2-284 |
| Cow position: | chr11:8819905-8820178 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 79 |
| Conread position: | 3-263 |
| Cow position: | chr11:54508631-54508898 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 13-283 |
| Cow position: | chr11:65323833-65323562 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 19-283 |
| Cow position: | chr11:38796520-38796785 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 24-291 |
| Cow position: | chr11:13454539-13454278 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 28-270 |
| Cow position: | chr11:51224358-51224594 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 29-357 |
| Cow position: | chr11:17452797-17453129 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 122, 48 |
| Conread position: | 31-227 |
| Cow position: | chr11:24539553-24539740 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 30 |
| Conread position: | 31-285 |
| Cow position: | chr11:26051792-26051544 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 35-236 |
| Cow position: | chr11:12317334-12317141 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 7 |
| Conread position: | 35-242 |
| Cow position: | chr11:19099750-19099550 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 42-242 |
| Cow position: | chr11:12177829-12178023 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 20, 77 |
| Conread position: | 42-274 |
| Cow position: | chr11:42466180-42465954 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 20, 26 |
| Conread position: | 42-284 |
| Cow position: | chr11:96853-96614 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 49-284 |
| Cow position: | chr11:74207769-74207543 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 50-284 |
| Cow position: | chr11:45853215-45852986 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 66-283 |
| Cow position: | chr11:15653256-15653464 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 67-284 |
| Cow position: | chr11:12178747-12178958 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 67-284 |
| Cow position: | chr11:84213960-84213747 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 67-357 |
| Cow position: | chr11:9473736-9473445 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 55 |
| Conread position: | 126-283 |
| Cow position: | chr11:40231178-40231019 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 123, 83 |
| Conread position: | 129-330 |
| Cow position: | chr11:40502645-40502439 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 109, 202 |
Show alignments to all cow chromosomes.