Cow genome map


           Conread name:
           OvF6-UMC-p6mm1-003-d08
        

               Conread position:
               1-242
               

               Cow position:
               chr18:48529193-48529436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               3-289
               

               Cow position:
               chr18:51300340-51300629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               34, 123
               

               Conread position:
               4-284
               

               Cow position:
               chr18:51330928-51331210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               34, 87
               

               Conread position:
               35-235
               

               Cow position:
               chr18:52655927-52656119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               38-283
               

               Cow position:
               chr18:41260280-41260516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 80
               

               Conread position:
               38-289
               

               Cow position:
               chr18:14816336-14816582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               57, 78
               

               Conread position:
               42-242
               

               Cow position:
               chr18:18215890-18215694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               42-283
               

               Cow position:
               chr18:902155-902393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               56-283
               

               Cow position:
               chr18:18854567-18854790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               183, 63
               

               Conread position:
               145-351
               

               Cow position:
               chr18:14527143-14527348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               101, 35
               
Show alignments to all cow chromosomes.