Cow genome map
| Conread name: | OvF6-UMC-p6mm1-003-d08 |
| Conread position: | 2-283 |
| Cow position: | chrX:2655507-2655787 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 2-284 |
| Cow position: | chrX:39765354-39765635 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 2-349 |
| Cow position: | chrX:23269396-23269042 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 24, 121 |
| Conread position: | 3-287 |
| Cow position: | chrX:23523000-23522726 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 92, 28 |
| Conread position: | 3-358 |
| Cow position: | chrX:37753219-37753582 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 4-270 |
| Cow position: | chrX:18289289-18289024 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 53 |
| Conread position: | 7-283 |
| Cow position: | chrX:5567226-5566957 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 239, 28 |
| Conread position: | 9-284 |
| Cow position: | chrX:48812158-48812437 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 23-284 |
| Cow position: | chrX:15569057-15568800 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 63 |
| Conread position: | 25-272 |
| Cow position: | chrX:33173334-33173087 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 26-236 |
| Cow position: | chrX:23452624-23452422 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 27-286 |
| Cow position: | chrX:25052098-25051841 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 30-235 |
| Cow position: | chrX:15122333-15122137 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 66, 12 |
| Conread position: | 35-236 |
| Cow position: | chrX:11950938-11950745 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 35-241 |
| Cow position: | chrX:30286238-30286436 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 7 |
| Conread position: | 35-247 |
| Cow position: | chrX:2479796-2479592 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 15 |
| Conread position: | 38-275 |
| Cow position: | chrX:15377826-15377599 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 38-284 |
| Cow position: | chrX:21206855-21206613 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 39-284 |
| Cow position: | chrX:21781169-21781408 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 42-284 |
| Cow position: | chrX:13667132-13666890 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 70-303 |
| Cow position: | chrX:21658416-21658640 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 126-349 |
| Cow position: | chrX:23928239-23928014 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 112 |
Show alignments to all cow chromosomes.