Cow genome map
| Conread name: | OvF6-UMC-p6mm3-006-a01 |
| Conread position: | 1-179 |
| Cow position: | chr25:33127969-33128146 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 1-246 |
| Cow position: | chr25:33145181-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 124, 132 |
| Conread position: | 1-290 |
| Cow position: | chr25:22235828-22236118 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 256, 0 |
| Conread position: | 1-352 |
| Cow position: | chr25:34769621-34769269 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 256, 299 |
| Conread position: | 1-353 |
| Cow position: | chr25:33157390-33157037 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 256, 329 |
| Conread position: | 2-209 |
| Cow position: | chr25:22235997-22236204 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 128, 133 |
| Conread position: | 2-274 |
| Cow position: | chr25:33157053-33156781 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-290 |
| Cow position: | chr25:33127886-33128175 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 258, 271 |
| Conread position: | 2-290 |
| Cow position: | chr25:33145098-33145387 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 2-290 |
| Cow position: | chr25:33157137-33156848 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 198, 208 |
| Conread position: | 2-290 |
| Cow position: | chr25:34447022-34447311 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 2-290 |
| Cow position: | chr25:34447190-34447479 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 255, 0 |
| Conread position: | 2-291 |
| Cow position: | chr25:23420551-23420841 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 204, 195 |
| Conread position: | 2-323 |
| Cow position: | chr25:366725-367048 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 113, 120 |
| Conread position: | 2-341 |
| Cow position: | chr25:34770040-34769699 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 126, 133 |
| Conread position: | 2-385 |
| Cow position: | chr25:34433524-34433901 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 126, 81 |
| Conread position: | 2-396 |
| Cow position: | chr25:34769872-34769481 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 131 |
| Conread position: | 2-399 |
| Cow position: | chr25:33157221-33156827 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 255, 293 |
| Conread position: | 8-289 |
| Cow position: | chr25:34762835-34763117 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 127 |
| Conread position: | 16-290 |
| Cow position: | chr25:23420481-23420756 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 241, 0 |
| Conread position: | 16-360 |
| Cow position: | chr25:33127732-33128076 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 241, 314 |
| Conread position: | 17-322 |
| Cow position: | chr25:33157458-33157151 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 24-397 |
| Cow position: | chr25:34770102-34769732 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 236, 303 |
| Conread position: | 26-290 |
| Cow position: | chr25:326947-327212 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 100 |
Show alignments to all cow chromosomes.