Cow genome map
Conread name: | Ova1-OVRM10018B04 |
Conread position: | 1-114 |
Cow position: | chr1:30519038-30519148 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 94 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 1-116 |
Cow position: | chr1:33712414-33712529 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 102 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 20, 25 |
Conread position: | 1-118 |
Cow position: | chr1:55321793-55321677 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 98 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 355-682 |
Cow position: | chr1:21087826-21088171 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 77 |
Conread position: | 356-656 |
Cow position: | chr1:9382138-9381816 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 233 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 358-679 |
Cow position: | chr1:97226289-97225956 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 153 |
Conread position: | 358-682 |
Cow position: | chr1:11291690-11291352 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 358-682 |
Cow position: | chr1:33851701-33852043 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 358-682 |
Cow position: | chr1:69766878-69767212 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 183 |
Conread position: | 358-682 |
Cow position: | chr1:89425989-89426331 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 78 |
Conread position: | 358-684 |
Cow position: | chr1:29609247-29608925 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 213 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 174, 141 |
Conread position: | 359-679 |
Cow position: | chr1:98659463-98659153 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 56 |
Conread position: | 368-682 |
Cow position: | chr1:44044206-44044540 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 375-677 |
Cow position: | chr1:31403053-31402738 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 229 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 153, 16 |
Conread position: | 375-682 |
Cow position: | chr1:43570970-43570657 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 208 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 132, 95 |
Conread position: | 376-569 |
Cow position: | chr1:31329953-31329759 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 141 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 57, 65 |
Conread position: | 376-679 |
Cow position: | chr1:57568371-57568690 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 64 |
Conread position: | 376-679 |
Cow position: | chr1:79456532-79456215 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 63 |
Conread position: | 376-679 |
Cow position: | chr1:82923738-82923432 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 69 |
Conread position: | 380-684 |
Cow position: | chr1:17941343-17941025 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 164, 68 |
Conread position: | 381-681 |
Cow position: | chr1:72186434-72186122 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 58 |
Conread position: | 382-642 |
Cow position: | chr1:22905224-22905483 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 183 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 153, 56 |
Conread position: | 382-679 |
Cow position: | chr1:34692667-34692971 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 224 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 109, 33 |
Conread position: | 382-679 |
Cow position: | chr1:91892675-91892361 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 382-679 |
Cow position: | chr1:99913864-99914178 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 383-503 |
Cow position: | chr1:89770215-89770095 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 66, 41 |
Conread position: | 383-511 |
Cow position: | chr1:72981715-72981843 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 383-511 |
Cow position: | chr1:85780332-85780204 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 105 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 383-534 |
Cow position: | chr1:24651727-24651878 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 123 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 56, 50 |
Conread position: | 383-571 |
Cow position: | chr1:85882440-85882628 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 383-577 |
Cow position: | chr1:91899438-91899633 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 110 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 190, 0 |
Conread position: | 383-612 |
Cow position: | chr1:58178543-58178300 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 176 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 157, 77 |
Conread position: | 383-627 |
Cow position: | chr1:86698770-86698512 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-634 |
Cow position: | chr1:58883620-58883354 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 236 |
Conread position: | 383-637 |
Cow position: | chr1:30519135-30519406 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 193 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 92, 66 |
Conread position: | 383-678 |
Cow position: | chr1:76545093-76544782 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:5502413-5502723 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 218 |
Conread position: | 383-679 |
Cow position: | chr1:8825497-8825804 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 187, 0 |
Conread position: | 383-679 |
Cow position: | chr1:21999509-21999199 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:25179585-25179272 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 202 |
Conread position: | 383-679 |
Cow position: | chr1:28873522-28873835 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:31418070-31417762 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 50 |
Conread position: | 383-679 |
Cow position: | chr1:42736899-42737213 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:52358830-52358517 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:58336283-58336593 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:62244198-62243885 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:63605331-63605021 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:69921990-69921680 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:72081225-72081521 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 383-679 |
Cow position: | chr1:73070608-73070300 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 232 |
Conread position: | 383-679 |
Cow position: | chr1:76752205-76751891 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 56 |
Conread position: | 383-679 |
Cow position: | chr1:82564945-82565258 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:88131219-88131531 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 383-679 |
Cow position: | chr1:93854969-93855274 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 383-679 |
Cow position: | chr1:94660120-94660430 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-679 |
Cow position: | chr1:102434591-102434283 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-682 |
Cow position: | chr1:17036117-17035801 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-682 |
Cow position: | chr1:28711358-28711647 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 0 |
Conread position: | 383-682 |
Cow position: | chr1:40053797-40054112 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 10 |
Conread position: | 383-682 |
Cow position: | chr1:40574655-40574971 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-682 |
Cow position: | chr1:40684255-40683942 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 77 |
Conread position: | 383-682 |
Cow position: | chr1:53198991-53199298 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 238 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 114, 237 |
Conread position: | 383-682 |
Cow position: | chr1:56163991-56164307 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-682 |
Cow position: | chr1:56490292-56490609 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 47 |
Conread position: | 383-682 |
Cow position: | chr1:65386774-65387086 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 246 |
Conread position: | 383-682 |
Cow position: | chr1:67834699-67834381 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 383-682 |
Cow position: | chr1:86547697-86547384 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 222 |
Conread position: | 384-679 |
Cow position: | chr1:30534575-30534263 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 385-676 |
Cow position: | chr1:69403430-69403738 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 54 |
Conread position: | 385-679 |
Cow position: | chr1:6194683-6194989 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 54 |
Conread position: | 385-679 |
Cow position: | chr1:11860791-11860494 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 226 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 151, 77 |
Conread position: | 385-682 |
Cow position: | chr1:29034740-29035046 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 238 |
Conread position: | 385-682 |
Cow position: | chr1:59209707-59209392 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 385-682 |
Cow position: | chr1:82912700-82912377 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 238 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 81, 76 |
Conread position: | 385-682 |
Cow position: | chr1:85792126-85792436 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 46 |
Conread position: | 385-684 |
Cow position: | chr1:15026805-15027121 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 219 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 81, 59 |
Conread position: | 386-678 |
Cow position: | chr1:17012294-17011984 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 386-679 |
Cow position: | chr1:56143887-56143577 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 386-679 |
Cow position: | chr1:82366629-82366939 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 217 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 149, 0 |
Conread position: | 386-681 |
Cow position: | chr1:67287273-67287579 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 255 |
Conread position: | 387-679 |
Cow position: | chr1:26518435-26518131 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 46 |
Conread position: | 389-679 |
Cow position: | chr1:48246285-48246587 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 397-628 |
Cow position: | chr1:57366666-57366420 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 143, 193 |
Conread position: | 399-679 |
Cow position: | chr1:1460726-1460459 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 266, 133 |
Conread position: | 408-679 |
Cow position: | chr1:24443855-24443567 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 214 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 17, 64 |
Conread position: | 533-679 |
Cow position: | chr1:81863895-81863749 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 557-679 |
Cow position: | chr1:72038922-72038804 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 103 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Show alignments to all cow chromosomes.