Cow genome map
| Conread name: | Ova1-OVRM10018B04 |
| Conread position: | 358-679 |
| Cow position: | chr13:34937637-34937965 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 358-681 |
| Cow position: | chr13:60466479-60466813 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 358-682 |
| Cow position: | chr13:50109604-50109938 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 383-534 |
| Cow position: | chr13:34910989-34910839 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 383-600 |
| Cow position: | chr13:3057941-3057707 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 383-619 |
| Cow position: | chr13:4941257-4941510 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-646 |
| Cow position: | chr13:15450937-15450660 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 383-654 |
| Cow position: | chr13:9044676-9044964 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-663 |
| Cow position: | chr13:13324918-13325206 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 227 |
| Conread position: | 383-677 |
| Cow position: | chr13:30238421-30238724 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 60 |
| Conread position: | 383-679 |
| Cow position: | chr13:3654145-3653836 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr13:4483971-4484281 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 383-679 |
| Cow position: | chr13:20541861-20541554 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 231 |
| Conread position: | 383-679 |
| Cow position: | chr13:30303452-30303767 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 383-679 |
| Cow position: | chr13:30656806-30656499 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 209 |
| Conread position: | 383-679 |
| Cow position: | chr13:31612133-31611818 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 269 |
| Conread position: | 383-679 |
| Cow position: | chr13:32545552-32545865 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 383-679 |
| Cow position: | chr13:32737651-32737340 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 87 |
| Conread position: | 383-679 |
| Cow position: | chr13:35757417-35757730 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-682 |
| Cow position: | chr13:2388649-2388328 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 241 |
| Conread position: | 383-682 |
| Cow position: | chr13:21840029-21839713 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-682 |
| Cow position: | chr13:31733916-31733600 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 383-682 |
| Cow position: | chr13:41316028-41316344 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 383-682 |
| Cow position: | chr13:47229832-47229516 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-684 |
| Cow position: | chr13:13900041-13900357 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 384-618 |
| Cow position: | chr13:5625903-5625655 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 141, 76 |
| Conread position: | 384-678 |
| Cow position: | chr13:15924207-15923896 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 55 |
| Conread position: | 384-679 |
| Cow position: | chr13:34868919-34869229 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 73 |
| Conread position: | 385-679 |
| Cow position: | chr13:1592979-1592668 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 205 |
| Conread position: | 385-679 |
| Cow position: | chr13:6667942-6667634 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 385-679 |
| Cow position: | chr13:30244507-30244197 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 270 |
| Conread position: | 385-679 |
| Cow position: | chr13:34042191-34041885 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 385-684 |
| Cow position: | chr13:34325384-34325072 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 222 |
| Conread position: | 386-534 |
| Cow position: | chr13:26844264-26844413 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 386-626 |
| Cow position: | chr13:2582479-2582233 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 117, 177 |
| Conread position: | 386-679 |
| Cow position: | chr13:23003130-23002821 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 206 |
| Conread position: | 386-679 |
| Cow position: | chr13:43982904-43982600 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 386-682 |
| Cow position: | chr13:17308645-17308959 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 44 |
| Conread position: | 388-627 |
| Cow position: | chr13:33336245-33335994 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 543-679 |
| Cow position: | chr13:11798546-11798418 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
Show alignments to all cow chromosomes.