Cow genome map

Conread name: Ova1-OVRM10018B04

Conread position: 1-117
Cow position:
Alignm length: 117
Alignm identity: 97
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position:
Alignm length: 117
Alignm identity: 99
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 358-678
Cow position:
Alignm length: 338
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 251

Conread position: 358-679
Cow position:
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 360-681
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 100

Conread position: 362-534
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 374-533
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 20

Conread position: 376-679
Cow position:
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 292

Conread position: 377-534
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 68

Conread position: 377-577
Cow position:
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 177

Conread position: 379-679
Cow position:
Alignm length: 333
Alignm identity: 242
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 157, 88

Conread position: 382-619
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 139

Conread position: 383-533
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 383-534
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 87

Conread position: 383-534
Cow position:
Alignm length: 153
Alignm identity: 122
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 56

Conread position: 383-538
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 383-671
Cow position:
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-672
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 229

Conread position: 383-678
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 59

Conread position: 383-679
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 207

Conread position: 383-679
Cow position:
Alignm length: 318
Alignm identity: 229
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 68, 78

Conread position: 383-679
Cow position:
Alignm length: 324
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 224, 163

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 235

Conread position: 383-679
Cow position:
Alignm length: 315
Alignm identity: 219
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 115, 60

Conread position: 383-679
Cow position:
Alignm length: 315
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-679
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 95, 0

Conread position: 383-679
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 383-679
Cow position:
Alignm length: 309
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 226

Conread position: 383-679
Cow position:
Alignm length: 310
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 315
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-681
Cow position:
Alignm length: 316
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 310

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 383-684
Cow position:
Alignm length: 319
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 384-619
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 49, 55

Conread position: 384-669
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 127, 250

Conread position: 384-679
Cow position:
Alignm length: 310
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 385-678
Cow position:
Alignm length: 311
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position:
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 30

Conread position: 385-679
Cow position:
Alignm length: 314
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 222

Conread position: 385-679
Cow position:
Alignm length: 309
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 385-679
Cow position:
Alignm length: 312
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 0

Conread position: 385-682
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 112, 41

Conread position: 385-683
Cow position:
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 64

Conread position: 386-679
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 84

Conread position: 386-679
Cow position:
Alignm length: 308
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-679
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 205

Conread position: 391-684
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 49, 42

Conread position: 398-679
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 201

Conread position: 413-538
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 463-679
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 149

Show alignments to all cow chromosomes.