Cow genome map

Conread name: Ova1-OVRM10018B04

Conread position: 1-117
Cow position:
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 1-117
Cow position:
Alignm length: 117
Alignm identity: 98
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-117
Cow position:
Alignm length: 117
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 2-112
Cow position:
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 79

Conread position: 5-110
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 353-508
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 66

Conread position: 358-636
Cow position:
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 358-679
Cow position:
Alignm length: 341
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 21

Conread position: 358-679
Cow position:
Alignm length: 339
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 358-681
Cow position:
Alignm length: 342
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 325

Conread position: 358-682
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 160

Conread position: 358-683
Cow position:
Alignm length: 345
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 114

Conread position: 374-678
Cow position:
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 375-619
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 64

Conread position: 376-488
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 376-679
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 380-612
Cow position:
Alignm length: 241
Alignm identity: 183
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 124, 129

Conread position: 380-679
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 54

Conread position: 380-679
Cow position:
Alignm length: 314
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 24

Conread position: 380-681
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 42

Conread position: 382-556
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 168

Conread position: 382-679
Cow position:
Alignm length: 307
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 154, 140

Conread position: 383-523
Cow position:
Alignm length: 141
Alignm identity: 115
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 383-529
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 383-534
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 383-642
Cow position:
Alignm length: 283
Alignm identity: 209
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 50, 56

Conread position: 383-644
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 139, 50

Conread position: 383-654
Cow position:
Alignm length: 287
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 56

Conread position: 383-675
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 115, 300

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 290

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 316
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 309
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 29

Conread position: 383-679
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 217

Conread position: 383-679
Cow position:
Alignm length: 310
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 200

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-679
Cow position:
Alignm length: 314
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-679
Cow position:
Alignm length: 311
Alignm identity: 221
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 153, 296

Conread position: 383-679
Cow position:
Alignm length: 311
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-679
Cow position:
Alignm length: 310
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 383-682
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 222

Conread position: 383-683
Cow position:
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 230

Conread position: 384-679
Cow position:
Alignm length: 310
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 135, 205

Conread position: 384-679
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 98

Conread position: 384-679
Cow position:
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 278

Conread position: 384-679
Cow position:
Alignm length: 313
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 280

Conread position: 384-682
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 265

Conread position: 385-533
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 385-534
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 385-679
Cow position:
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 121

Conread position: 385-682
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 386-634
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 148, 56

Conread position: 386-679
Cow position:
Alignm length: 315
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 0

Conread position: 386-682
Cow position:
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 44

Conread position: 387-679
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 149, 80

Conread position: 388-575
Cow position:
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 401-677
Cow position:
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 429-672
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 106, 42

Conread position: 440-679
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 100, 122

Conread position: 458-682
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 79, 182

Conread position: 483-679
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 23

Conread position: 529-679
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 555-681
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 117, 0

Show alignments to all cow chromosomes.