Cow genome map
| Conread name: | Ova1-OVRM10018B04 |
| Conread position: | 1-117 |
| Cow position: | chr21:21915158-21915274 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-117 |
| Cow position: | chr21:27282858-27282974 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 351-679 |
| Cow position: | chr21:2416746-2417091 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 296 |
| Conread position: | 358-679 |
| Cow position: | chr21:28735775-28736114 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 114 |
| Conread position: | 358-682 |
| Cow position: | chr21:12055462-12055123 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 248 |
| Conread position: | 376-623 |
| Cow position: | chr21:27282951-27283214 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 376-637 |
| Cow position: | chr21:21925756-21925490 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 15, 69 |
| Conread position: | 382-682 |
| Cow position: | chr21:39425626-39425942 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 37 |
| Conread position: | 383-603 |
| Cow position: | chr21:33252077-33252308 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 153, 69 |
| Conread position: | 383-623 |
| Cow position: | chr21:2511460-2511717 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 383-634 |
| Cow position: | chr21:27070696-27070428 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-643 |
| Cow position: | chr21:30562374-30562646 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-665 |
| Cow position: | chr21:31559088-31558795 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 291 |
| Conread position: | 383-677 |
| Cow position: | chr21:2475976-2475665 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-677 |
| Cow position: | chr21:23812743-23813053 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-678 |
| Cow position: | chr21:9892504-9892784 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 383-679 |
| Cow position: | chr21:29649-29958 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 233 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 6, 78 |
| Conread position: | 383-679 |
| Cow position: | chr21:146494-146805 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr21:467457-467754 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 123, 87 |
| Conread position: | 383-679 |
| Cow position: | chr21:1192323-1192636 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-679 |
| Cow position: | chr21:10567240-10567553 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 383-679 |
| Cow position: | chr21:13313337-13313639 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 234 |
| Conread position: | 383-679 |
| Cow position: | chr21:30599356-30599046 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr21:37046185-37046498 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-679 |
| Cow position: | chr21:40271109-40270796 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-682 |
| Cow position: | chr21:11506161-11506476 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 143 |
| Conread position: | 383-682 |
| Cow position: | chr21:37371810-37372120 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 241 |
| Conread position: | 384-679 |
| Cow position: | chr21:2711070-2711366 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 78 |
| Conread position: | 385-534 |
| Cow position: | chr21:21518090-21518239 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-679 |
| Cow position: | chr21:10850650-10850956 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 385-679 |
| Cow position: | chr21:35144330-35144638 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 386-679 |
| Cow position: | chr21:1287651-1287342 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 12 |
| Conread position: | 386-679 |
| Cow position: | chr21:4094072-4094381 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 126, 120 |
| Conread position: | 392-538 |
| Cow position: | chr21:28255777-28255931 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 459-679 |
| Cow position: | chr21:4184560-4184780 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-679 |
| Cow position: | chr21:28256161-28256306 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.