Cow genome map


           Conread name:
           Ova1-OVRM10018B04
        

               Conread position:
               1-105
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-116
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               350-679
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 6
               

               Conread position:
               358-539
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               358-626
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               178, 86
               

               Conread position:
               358-679
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               358-682
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               358-682
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               359-682
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               376-679
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 0
               

               Conread position:
               380-679
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 302
               

               Conread position:
               381-678
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               154, 89
               

               Conread position:
               383-533
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               383-621
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               383-678
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 78
               

               Conread position:
               383-678
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 87
               

               Conread position:
               383-678
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 63
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 118
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               383-679
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               383-680
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 228
               

               Conread position:
               383-682
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               383-682
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               383-682
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               383-682
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               385-571
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               385-677
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               385-679
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 85
               

               Conread position:
               385-679
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               385-682
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               386-534
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-678
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 180
               

               Conread position:
               386-679
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               386-682
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 238
               

               Conread position:
               387-679
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               387-682
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               407-678
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               538-679
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.