Cow genome map
| Conread name: | Ova1-OVRM10018B04 |
| Conread position: | 4-113 |
| Cow position: | chr28:10497669-10497560 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-682 |
| Cow position: | chr28:6779926-6779585 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 359-507 |
| Cow position: | chr28:7880939-7881089 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 368-670 |
| Cow position: | chr28:8379261-8379579 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 71 |
| Conread position: | 377-679 |
| Cow position: | chr28:32791937-32791624 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 13 |
| Conread position: | 380-679 |
| Cow position: | chr28:2988803-2988487 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 380-679 |
| Cow position: | chr28:10071722-10072026 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 226 |
| Conread position: | 383-529 |
| Cow position: | chr28:29820177-29820322 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 383-533 |
| Cow position: | chr28:8720855-8720705 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-534 |
| Cow position: | chr28:485126-484975 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 383-556 |
| Cow position: | chr28:10581542-10581370 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-571 |
| Cow position: | chr28:2084035-2084220 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 383-605 |
| Cow position: | chr28:34594421-34594660 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 383-619 |
| Cow position: | chr28:782836-783087 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-660 |
| Cow position: | chr28:7822694-7822988 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-663 |
| Cow position: | chr28:26425808-26425516 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 250 |
| Conread position: | 383-677 |
| Cow position: | chr28:7789510-7789198 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 100 |
| Conread position: | 383-679 |
| Cow position: | chr28:1167439-1167126 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr28:1505308-1505620 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 284 |
| Conread position: | 383-679 |
| Cow position: | chr28:5113855-5113545 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 383-679 |
| Cow position: | chr28:5566588-5566905 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 383-679 |
| Cow position: | chr28:7740922-7741222 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr28:12150746-12151056 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr28:12409785-12409475 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-679 |
| Cow position: | chr28:13460412-13460724 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 87 |
| Conread position: | 383-679 |
| Cow position: | chr28:18520003-18519695 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 29 |
| Conread position: | 383-679 |
| Cow position: | chr28:22260708-22260401 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 383-682 |
| Cow position: | chr28:2724486-2724170 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-682 |
| Cow position: | chr28:6538825-6538510 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 242 |
| Conread position: | 383-682 |
| Cow position: | chr28:14750982-14751295 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 384-534 |
| Cow position: | chr28:24668052-24668193 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 385-533 |
| Cow position: | chr28:3020305-3020161 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 385-682 |
| Cow position: | chr28:24589292-24589606 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 49 |
| Conread position: | 386-679 |
| Cow position: | chr28:1386959-1386650 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 386-679 |
| Cow position: | chr28:7002435-7002746 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 303 |
| Conread position: | 387-679 |
| Cow position: | chr28:1814422-1814113 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 391-647 |
| Cow position: | chr28:5798192-5798463 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 392-606 |
| Cow position: | chr28:7810951-7811165 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 524-679 |
| Cow position: | chr28:7881846-7881695 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 541-681 |
| Cow position: | chr28:8720333-8720199 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.