Cow genome map
| Conread name: | Ova1-OVRM10018B04 |
| Conread position: | 4-110 |
| Cow position: | chr4:21256382-21256488 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-677 |
| Cow position: | chr4:51043149-51042817 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 19, 86 |
| Conread position: | 358-681 |
| Cow position: | chr4:100835-100495 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 330 |
| Conread position: | 358-681 |
| Cow position: | chr4:57984086-57984427 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 358-682 |
| Cow position: | chr4:5880264-5880606 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 375-679 |
| Cow position: | chr4:31669395-31669713 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 376-646 |
| Cow position: | chr4:45049174-45048887 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 376-679 |
| Cow position: | chr4:25599378-25599058 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 63 |
| Conread position: | 381-684 |
| Cow position: | chr4:356038-356351 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 382-586 |
| Cow position: | chr4:6268504-6268283 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 383-498 |
| Cow position: | chr4:33493956-33494071 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 383-593 |
| Cow position: | chr4:28831471-28831687 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 383-634 |
| Cow position: | chr4:17926123-17925855 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-650 |
| Cow position: | chr4:44725216-44725499 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 119 |
| Conread position: | 383-678 |
| Cow position: | chr4:6490233-6489926 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-678 |
| Cow position: | chr4:12241086-12240772 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 36 |
| Conread position: | 383-678 |
| Cow position: | chr4:43881240-43881542 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr4:26886730-26886417 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-679 |
| Cow position: | chr4:36896499-36896810 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 383-679 |
| Cow position: | chr4:46664647-46664959 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-679 |
| Cow position: | chr4:48026528-48026840 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 237 |
| Conread position: | 383-679 |
| Cow position: | chr4:60264033-60263725 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 220 |
| Conread position: | 383-682 |
| Cow position: | chr4:3125920-3126232 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 219 |
| Conread position: | 383-682 |
| Cow position: | chr4:16056725-16057040 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 225 |
| Conread position: | 383-682 |
| Cow position: | chr4:16326650-16326334 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 383-682 |
| Cow position: | chr4:18190530-18190835 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 173, 158 |
| Conread position: | 383-682 |
| Cow position: | chr4:18424400-18424085 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 236 |
| Conread position: | 384-610 |
| Cow position: | chr4:41120448-41120691 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 384-679 |
| Cow position: | chr4:43319514-43319206 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 276 |
| Conread position: | 385-504 |
| Cow position: | chr4:12587432-12587551 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 385-679 |
| Cow position: | chr4:16360015-16360310 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 274 |
| Conread position: | 385-679 |
| Cow position: | chr4:33072694-33072383 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 54 |
| Conread position: | 385-682 |
| Cow position: | chr4:41954600-41954911 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 385-682 |
| Cow position: | chr4:41958255-41958566 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 385-683 |
| Cow position: | chr4:32212294-32212609 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 386-679 |
| Cow position: | chr4:13493445-13493756 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 393-681 |
| Cow position: | chr4:529533-529838 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 295 |
| Conread position: | 399-678 |
| Cow position: | chr4:159296-159594 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 434-679 |
| Cow position: | chr4:27301276-27301031 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 7, 164 |
Show alignments to all cow chromosomes.