Cow genome map
| Conread name: | Ova1-OVRM10024C02 |
| Conread position: | 1-102 |
| Cow position: | chr11:377822-377924 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-107 |
| Cow position: | chr11:77207875-77207770 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-108 |
| Cow position: | chr11:55117299-55117193 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-112 |
| Cow position: | chr11:29947100-29947210 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-112 |
| Cow position: | chr11:58990337-58990227 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-113 |
| Cow position: | chr11:50197618-50197729 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-114 |
| Cow position: | chr11:4323193-4323081 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-114 |
| Cow position: | chr11:6835355-6835242 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 78 |
| Conread position: | 1-114 |
| Cow position: | chr11:36182515-36182403 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-114 |
| Cow position: | chr11:63065480-63065368 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-118 |
| Cow position: | chr11:1362654-1362769 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-118 |
| Cow position: | chr11:16251422-16251539 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-120 |
| Cow position: | chr11:31885347-31885227 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 1-120 |
| Cow position: | chr11:37563294-37563176 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 1-122 |
| Cow position: | chr11:7333895-7334015 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 1-122 |
| Cow position: | chr11:50778197-50778076 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-123 |
| Cow position: | chr11:7590017-7589896 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-126 |
| Cow position: | chr11:43646592-43646716 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 48 |
| Conread position: | 1-127 |
| Cow position: | chr11:8828804-8828927 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-127 |
| Cow position: | chr11:30110794-30110673 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-127 |
| Cow position: | chr11:31873392-31873270 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-142 |
| Cow position: | chr11:10620499-10620639 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 1-146 |
| Cow position: | chr11:1668504-1668357 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-242 |
| Cow position: | chr11:42003131-42003368 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 172, 7 |
| Conread position: | 1-246 |
| Cow position: | chr11:19508123-19507897 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 227, 18 |
| Conread position: | 1-246 |
| Cow position: | chr11:25165270-25165030 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 162, 74 |
| Conread position: | 1-250 |
| Cow position: | chr11:56654373-56654131 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 226, 71 |
| Conread position: | 1-250 |
| Cow position: | chr11:84531459-84531711 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 2-127 |
| Cow position: | chr11:46580198-46580068 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 2-197 |
| Cow position: | chr11:49148874-49148684 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 155, 76 |
| Conread position: | 3-100 |
| Cow position: | chr11:48932759-48932854 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-124 |
| Cow position: | chr11:9234452-9234333 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-114 |
| Cow position: | chr11:8988405-8988515 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 4-114 |
| Cow position: | chr11:13191043-13190934 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-127 |
| Cow position: | chr11:50589910-50589789 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 4-245 |
| Cow position: | chr11:46772734-46772969 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 5-123 |
| Cow position: | chr11:55333731-55333615 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 5-134 |
| Cow position: | chr11:9221903-9222031 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 6-129 |
| Cow position: | chr11:67600589-67600467 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 6-250 |
| Cow position: | chr11:18484338-18484580 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 221, 72 |
| Conread position: | 6-272 |
| Cow position: | chr11:20491393-20491129 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 162, 71 |
| Conread position: | 7-127 |
| Cow position: | chr11:70278754-70278874 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 8-127 |
| Cow position: | chr11:63920470-63920586 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 14-126 |
| Cow position: | chr11:33526889-33526779 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.