Cow genome map
| Conread name: | Ova1-OVRM10024C02 |
| Conread position: | 1-98 |
| Cow position: | chr16:38905381-38905477 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-100 |
| Cow position: | chr16:43804342-43804244 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-106 |
| Cow position: | chr16:35188099-35187996 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-107 |
| Cow position: | chr16:9933004-9932896 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 1-108 |
| Cow position: | chr16:17745680-17745573 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-108 |
| Cow position: | chr16:50417842-50417949 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-110 |
| Cow position: | chr16:51399901-51400009 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-114 |
| Cow position: | chr16:820096-819984 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-114 |
| Cow position: | chr16:8807246-8807357 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-117 |
| Cow position: | chr16:52218934-52218819 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-118 |
| Cow position: | chr16:48006646-48006761 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-120 |
| Cow position: | chr16:33405912-33406030 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-122 |
| Cow position: | chr16:18205816-18205696 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-123 |
| Cow position: | chr16:11082786-11082668 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 1-126 |
| Cow position: | chr16:46434274-46434395 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-126 |
| Cow position: | chr16:53613143-53613020 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:22842208-22842333 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:23025186-23025066 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:41752728-41752853 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:50934289-50934413 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-127 |
| Cow position: | chr16:55586755-55586881 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-147 |
| Cow position: | chr16:8366979-8367125 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-219 |
| Cow position: | chr16:47518695-47518474 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 76 |
| Conread position: | 1-242 |
| Cow position: | chr16:13043640-13043399 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 127, 71 |
| Conread position: | 1-250 |
| Cow position: | chr16:27005043-27004798 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 2-133 |
| Cow position: | chr16:4979655-4979530 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 2-250 |
| Cow position: | chr16:14242222-14241991 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 128 |
| Conread position: | 3-108 |
| Cow position: | chr16:34168438-34168334 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-114 |
| Cow position: | chr16:18036809-18036699 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 3-114 |
| Cow position: | chr16:29380097-29379987 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 4-114 |
| Cow position: | chr16:4972183-4972292 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 4-245 |
| Cow position: | chr16:50519577-50519351 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 223, 30 |
| Conread position: | 6-118 |
| Cow position: | chr16:13307026-13307134 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 6-242 |
| Cow position: | chr16:23681212-23680987 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 221, 78 |
| Conread position: | 14-267 |
| Cow position: | chr16:48145566-48145818 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 38-250 |
| Cow position: | chr16:3821009-3820805 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 24, 47 |
Show alignments to all cow chromosomes.