Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 2-445
Cow position: chr12:28650486-28650935 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 203

Conread position: 3-448
Cow position: chr12:7001039-7000622 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 135

Conread position: 3-448
Cow position: chr12:8869326-8868894 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 52

Conread position: 7-446
Cow position: chr12:5707691-5708084 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 323, 11

Conread position: 8-442
Cow position: chr12:6210594-6210183 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 17

Conread position: 8-448
Cow position: chr12:28582939-28582523 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 73

Conread position: 41-390
Cow position: chr12:1848949-1848611 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 26

Conread position: 57-448
Cow position: chr12:37994142-37993751 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 262

Conread position: 70-393
Cow position: chr12:29694424-29694120 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 231, 56

Conread position: 70-448
Cow position: chr12:34006899-34007288 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 76-448
Cow position: chr12:6411124-6410754 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 23

Conread position: 103-416
Cow position: chr12:31841073-31841387 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 7, 94

Conread position: 114-447
Cow position: chr12:35771396-35771041 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 256
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 9, 304

Conread position: 115-438
Cow position: chr12:32391488-32391819 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 116-420
Cow position: chr12:1444096-1443787 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 7

Conread position: 122-448
Cow position: chr12:8943567-8943243 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 9

Conread position: 132-444
Cow position: chr12:24032672-24032982 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 134-384
Cow position: chr12:4134329-4134588 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 28, 133

Conread position: 140-415
Cow position: chr12:2805369-2805100 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 12

Conread position: 146-448
Cow position: chr12:34466321-34466023 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 42

Conread position: 149-446
Cow position: chr12:40110064-40110361 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 149-447
Cow position: chr12:25561049-25561350 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 9

Conread position: 150-448
Cow position: chr12:12304079-12304368 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 62

Conread position: 151-448
Cow position: chr12:24107866-24107564 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 118

Conread position: 152-439
Cow position: chr12:44518057-44517764 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 153-448
Cow position: chr12:3510249-3510541 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 109, 55

Conread position: 160-448
Cow position: chr12:19664822-19664551 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 158, 14

Conread position: 161-398
Cow position: chr12:12017568-12017809 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 209

Conread position: 161-448
Cow position: chr12:6241001-6241300 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 166

Conread position: 162-438
Cow position: chr12:33323805-33323525 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 161

Conread position: 162-445
Cow position: chr12:22047161-22047448 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 23, 13

Conread position: 163-448
Cow position: chr12:30805547-30805834 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 102

Conread position: 163-448
Cow position: chr12:44596120-44595829 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 32, 25

Conread position: 164-443
Cow position: chr12:31429863-31429592 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 12

Conread position: 165-419
Cow position: chr12:5800734-5800983 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 136, 36

Conread position: 165-444
Cow position: chr12:17495496-17495231 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 36, 96

Conread position: 165-446
Cow position: chr12:30753423-30753699 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 54

Conread position: 165-448
Cow position: chr12:2711188-2711479 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 104

Conread position: 166-364
Cow position: chr12:5134836-5135038 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 159

Conread position: 166-406
Cow position: chr12:34385817-34385574 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 112

Conread position: 166-447
Cow position: chr12:20326468-20326754 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 44

Conread position: 166-448
Cow position: chr12:4116202-4116470 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 135, 73

Conread position: 166-448
Cow position: chr12:17881569-17881842 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 30, 58

Conread position: 166-448
Cow position: chr12:29995765-29995481 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 35, 96

Conread position: 166-448
Cow position: chr12:30437948-30438221 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 135, 90

Conread position: 166-448
Cow position: chr12:31959590-31959867 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 35, 126

Conread position: 166-448
Cow position: chr12:44905334-44905613 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 61, 193

Conread position: 167-444
Cow position: chr12:29484193-29483909 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 29, 102

Conread position: 168-396
Cow position: chr12:9414067-9413853 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 27

Conread position: 168-396
Cow position: chr12:34473914-34473695 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 13

Conread position: 168-406
Cow position: chr12:47928913-47929152 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 93

Conread position: 170-445
Cow position: chr12:7977748-7978018 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 30, 89

Conread position: 171-393
Cow position: chr12:40270384-40270166 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 30, 79

Conread position: 171-438
Cow position: chr12:5714331-5714601 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 115

Conread position: 171-446
Cow position: chr12:11835944-11836213 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 90

Conread position: 172-444
Cow position: chr12:19715324-19715059 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 178, 88

Conread position: 172-445
Cow position: chr12:2286284-2286561 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 29, 152

Conread position: 172-447
Cow position: chr12:42602533-42602263 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 90, 20

Conread position: 172-448
Cow position: chr12:5905760-5906037 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 29, 104

Conread position: 172-448
Cow position: chr12:42181438-42181148 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 25, 158

Conread position: 173-447
Cow position: chr12:42254362-42254647 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 26, 274

Conread position: 176-445
Cow position: chr12:31532694-31532422 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 154, 28

Conread position: 176-448
Cow position: chr12:3950644-3950364 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 20, 198

Conread position: 176-448
Cow position: chr12:9914496-9914770 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 179-447
Cow position: chr12:3039224-3039491 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 17, 81

Conread position: 182-429
Cow position: chr12:37733064-37732818 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 61

Conread position: 182-437
Cow position: chr12:37727860-37728115 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 61

Conread position: 184-442
Cow position: chr12:41214603-41214346 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 78, 27

Conread position: 187-448
Cow position: chr12:36501235-36500967 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 16, 172

Conread position: 188-437
Cow position: chr12:25320642-25320892 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 73

Conread position: 189-447
Cow position: chr12:9482579-9482325 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 81

Conread position: 191-448
Cow position: chr12:18943921-18943677 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 110, 69

Conread position: 195-448
Cow position: chr12:30662223-30661969 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 25, 90

Conread position: 200-431
Cow position: chr12:17702501-17702261 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 62, 124

Conread position: 205-445
Cow position: chr12:46333099-46333326 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 23

Conread position: 207-445
Cow position: chr12:4182957-4182713 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 55, 118

Conread position: 217-446
Cow position: chr12:24211163-24211392 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 7, 100

Conread position: 230-448
Cow position: chr12:30476239-30476463 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 82

Conread position: 232-447
Cow position: chr12:13996271-13996044 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 30, 157

Conread position: 232-448
Cow position: chr12:15162914-15163121 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 53

Conread position: 235-446
Cow position: chr12:38512075-38511857 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 31, 50

Conread position: 235-448
Cow position: chr12:38454685-38454890 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 48

Conread position: 239-448
Cow position: chr12:3906239-3906455 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 87

Conread position: 239-448
Cow position: chr12:18964158-18963947 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 82

Conread position: 243-431
Cow position: chr12:44559361-44559553 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 36, 25

Conread position: 243-442
Cow position: chr12:18021368-18021567 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 19, 45

Conread position: 253-447
Cow position: chr12:33851140-33851341 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 9, 61

Conread position: 270-448
Cow position: chr12:33976002-33976180 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 49

Conread position: 272-447
Cow position: chr12:13643041-13643214 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 26

Conread position: 275-445
Cow position: chr12:30227422-30227252 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 46

Conread position: 275-448
Cow position: chr12:25452638-25452466 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 23

Conread position: 275-448
Cow position: chr12:29921975-29921804 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 11

Conread position: 287-446
Cow position: chr12:10491090-10491251 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 15, 63

Conread position: 287-448
Cow position: chr12:38774422-38774262 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 35

Conread position: 292-448
Cow position: chr12:23916665-23916827 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 29

Conread position: 292-448
Cow position: chr12:25340336-25340501 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 138

Conread position: 294-448
Cow position: chr12:9894608-9894763 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 36, 99

Conread position: 296-445
Cow position: chr12:3623520-3623672 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 139

Conread position: 297-448
Cow position: chr12:25188016-25188167 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 33, 24

Conread position: 300-443
Cow position: chr12:42233888-42234032 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 134

Conread position: 329-448
Cow position: chr12:7110060-7110178 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 77

Show alignments to all cow chromosomes.