Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-448
Cow position:
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 22

Conread position: 2-432
Cow position:
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 143

Conread position: 3-448
Cow position:
Alignm length: 453
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 4-416
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 7

Conread position: 4-448
Cow position:
Alignm length: 454
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 109

Conread position: 4-448
Cow position:
Alignm length: 459
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 122

Conread position: 8-448
Cow position:
Alignm length: 459
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 115

Conread position: 8-448
Cow position:
Alignm length: 446
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 140

Conread position: 19-448
Cow position:
Alignm length: 439
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 84

Conread position: 23-408
Cow position:
Alignm length: 390
Alignm identity: 254
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 194, 114

Conread position: 50-448
Cow position:
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 9

Conread position: 57-448
Cow position:
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 71

Conread position: 83-448
Cow position:
Alignm length: 371
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 226, 47

Conread position: 112-438
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 47, 19

Conread position: 113-447
Cow position:
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 52

Conread position: 123-396
Cow position:
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 178, 52

Conread position: 123-445
Cow position:
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 50

Conread position: 127-448
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 131-448
Cow position:
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 30

Conread position: 133-448
Cow position:
Alignm length: 334
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 33, 94

Conread position: 144-443
Cow position:
Alignm length: 304
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 108

Conread position: 144-448
Cow position:
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 8

Conread position: 146-448
Cow position:
Alignm length: 319
Alignm identity: 234
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 12

Conread position: 153-443
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 16, 36

Conread position: 155-448
Cow position:
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 106

Conread position: 155-448
Cow position:
Alignm length: 300
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 85

Conread position: 156-446
Cow position:
Alignm length: 303
Alignm identity: 215
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 13, 204

Conread position: 160-432
Cow position:
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 164

Conread position: 160-438
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 161-409
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 47

Conread position: 161-443
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 40, 115

Conread position: 161-445
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 13

Conread position: 161-448
Cow position:
Alignm length: 300
Alignm identity: 218
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 35, 7

Conread position: 163-405
Cow position:
Alignm length: 250
Alignm identity: 176
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 37, 77

Conread position: 163-440
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 283

Conread position: 163-445
Cow position:
Alignm length: 289
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 91

Conread position: 163-448
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 138, 36

Conread position: 163-448
Cow position:
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 138, 33

Conread position: 163-448
Cow position:
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 164-442
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 277

Conread position: 165-394
Cow position:
Alignm length: 239
Alignm identity: 166
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 136, 36

Conread position: 165-432
Cow position:
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 122

Conread position: 165-445
Cow position:
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 96

Conread position: 165-448
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 88

Conread position: 165-448
Cow position:
Alignm length: 307
Alignm identity: 226
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 36, 292

Conread position: 166-344
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 35, 159

Conread position: 166-443
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 35, 95

Conread position: 166-445
Cow position:
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 34

Conread position: 166-446
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 229

Conread position: 166-446
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 159

Conread position: 166-446
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 87

Conread position: 166-447
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 36, 160

Conread position: 166-448
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 35, 45

Conread position: 166-448
Cow position:
Alignm length: 292
Alignm identity: 219
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 135, 73

Conread position: 166-448
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 95

Conread position: 170-448
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 170-448
Cow position:
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 146

Conread position: 172-406
Cow position:
Alignm length: 240
Alignm identity: 184
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 90, 28

Conread position: 172-433
Cow position:
Alignm length: 265
Alignm identity: 192
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 129, 19

Conread position: 172-444
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 28, 72

Conread position: 172-446
Cow position:
Alignm length: 287
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 222

Conread position: 172-447
Cow position:
Alignm length: 280
Alignm identity: 194
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 180, 20

Conread position: 172-448
Cow position:
Alignm length: 284
Alignm identity: 207
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 29

Conread position: 172-448
Cow position:
Alignm length: 283
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 88

Conread position: 172-448
Cow position:
Alignm length: 286
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 129, 88

Conread position: 176-364
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 150

Conread position: 176-419
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 150

Conread position: 176-448
Cow position:
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 84

Conread position: 176-448
Cow position:
Alignm length: 274
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 92

Conread position: 178-431
Cow position:
Alignm length: 261
Alignm identity: 196
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 23, 107

Conread position: 178-448
Cow position:
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 54

Conread position: 179-448
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 36

Conread position: 179-448
Cow position:
Alignm length: 276
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 124

Conread position: 180-422
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 18, 89

Conread position: 182-407
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 79

Conread position: 183-418
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 186-436
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 15, 53

Conread position: 188-405
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 142, 72

Conread position: 188-444
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 12, 53

Conread position: 189-448
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 80

Conread position: 192-446
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 212

Conread position: 193-442
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 79

Conread position: 194-439
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 16, 55

Conread position: 195-445
Cow position:
Alignm length: 257
Alignm identity: 192
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 107, 48

Conread position: 195-448
Cow position:
Alignm length: 263
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 73

Conread position: 195-448
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 67, 59

Conread position: 196-448
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 7, 132

Conread position: 204-448
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 49, 119

Conread position: 205-447
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 18, 65

Conread position: 216-448
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 40

Conread position: 216-448
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 33, 230

Conread position: 218-448
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 48, 72

Conread position: 221-444
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 28

Conread position: 223-428
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 78, 37

Conread position: 223-448
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 98

Conread position: 225-446
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 144

Conread position: 228-448
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 95

Conread position: 229-448
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 32

Conread position: 229-448
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 72, 31

Conread position: 230-448
Cow position:
Alignm length: 228
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 55

Conread position: 233-413
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 68, 35

Conread position: 235-448
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 87

Conread position: 238-448
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 22

Conread position: 239-447
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 29

Conread position: 243-448
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 17

Conread position: 262-448
Cow position:
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 19, 61

Conread position: 267-448
Cow position:
Alignm length: 186
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 55

Conread position: 268-431
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 273-416
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 47

Conread position: 275-448
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 45

Conread position: 276-448
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 25, 47

Conread position: 291-448
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 10, 91

Conread position: 295-431
Cow position:
Alignm length: 141
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 25

Conread position: 297-443
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 33, 24

Conread position: 300-438
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 20

Conread position: 300-448
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 21

Conread position: 300-448
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 138

Conread position: 314-445
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 94

Conread position: 314-445
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 94

Show alignments to all cow chromosomes.