Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-137
Cow position: chr20:23871170-23871034 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 10, 18

Conread position: 1-148
Cow position: chr20:7592418-7592272 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 22

Conread position: 5-448
Cow position: chr20:34776786-34777242 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 7-394
Cow position: chr20:22007107-22007508 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 269

Conread position: 7-429
Cow position: chr20:6848256-6848675 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 58

Conread position: 7-444
Cow position: chr20:31077187-31077611 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 94

Conread position: 8-429
Cow position: chr20:26469426-26469018 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 118

Conread position: 11-444
Cow position: chr20:14735316-14735727 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 32

Conread position: 11-448
Cow position: chr20:13652708-13652305 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 62

Conread position: 11-448
Cow position: chr20:40512132-40511694 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 163

Conread position: 62-396
Cow position: chr20:29633314-29632990 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 139, 73

Conread position: 74-446
Cow position: chr20:20983694-20984052 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 21

Conread position: 97-448
Cow position: chr20:15235475-15235823 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 119, 30

Conread position: 112-448
Cow position: chr20:3599669-3599333 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 163

Conread position: 125-447
Cow position: chr20:34918017-34918332 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 38, 6

Conread position: 132-448
Cow position: chr20:6096737-6096433 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 20

Conread position: 134-445
Cow position: chr20:37200106-37200422 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 128, 67

Conread position: 141-442
Cow position: chr20:4621584-4621284 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 144-431
Cow position: chr20:27339823-27340109 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 146-445
Cow position: chr20:24002085-24002375 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 16, 29

Conread position: 146-448
Cow position: chr20:13967503-13967194 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 118

Conread position: 152-448
Cow position: chr20:16715163-16715453 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 110

Conread position: 155-447
Cow position: chr20:25686581-25686287 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 107, 10

Conread position: 160-448
Cow position: chr20:22959569-22959285 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 100

Conread position: 160-448
Cow position: chr20:33532083-33532365 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 84

Conread position: 161-439
Cow position: chr20:21714524-21714811 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 126

Conread position: 161-447
Cow position: chr20:6423737-6424032 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 167

Conread position: 162-448
Cow position: chr20:6240755-6240458 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 166

Conread position: 165-438
Cow position: chr20:15068921-15069194 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 37, 90

Conread position: 165-445
Cow position: chr20:11923462-11923187 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 11

Conread position: 165-447
Cow position: chr20:6903106-6903375 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 230, 46

Conread position: 166-394
Cow position: chr20:7806784-7806551 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 33, 228

Conread position: 166-431
Cow position: chr20:27314460-27314716 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 51

Conread position: 166-442
Cow position: chr20:32636787-32636516 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 95

Conread position: 166-443
Cow position: chr20:10200119-10200403 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 123

Conread position: 166-443
Cow position: chr20:15761170-15760892 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 157

Conread position: 166-445
Cow position: chr20:31261511-31261783 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 137, 82

Conread position: 166-447
Cow position: chr20:11453576-11453297 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 133

Conread position: 166-448
Cow position: chr20:9536912-9537201 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 120

Conread position: 166-448
Cow position: chr20:18185357-18185629 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 32, 95

Conread position: 166-448
Cow position: chr20:20201770-20202056 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 36, 66

Conread position: 166-448
Cow position: chr20:33435387-33435102 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 26

Conread position: 167-440
Cow position: chr20:7659430-7659162 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 95, 20

Conread position: 167-448
Cow position: chr20:24521530-24521811 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 102

Conread position: 167-448
Cow position: chr20:35797385-35797674 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 156

Conread position: 168-442
Cow position: chr20:35907265-35907000 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 137, 9

Conread position: 168-444
Cow position: chr20:19751089-19751365 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 107

Conread position: 168-448
Cow position: chr20:21928678-21928967 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 107

Conread position: 170-402
Cow position: chr20:10468853-10469080 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 59

Conread position: 170-446
Cow position: chr20:40256752-40257030 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 170-448
Cow position: chr20:42469548-42469823 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 51

Conread position: 171-404
Cow position: chr20:32153294-32153522 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 24

Conread position: 171-433
Cow position: chr20:26679907-26680172 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 91, 41

Conread position: 171-448
Cow position: chr20:6890488-6890776 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 162

Conread position: 172-365
Cow position: chr20:41119705-41119891 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 158, 19

Conread position: 172-445
Cow position: chr20:17251495-17251777 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 27

Conread position: 172-448
Cow position: chr20:6054728-6054447 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 90

Conread position: 172-448
Cow position: chr20:9473830-9473550 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 172-448
Cow position: chr20:12996225-12995943 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 115

Conread position: 172-448
Cow position: chr20:34001612-34001327 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 152

Conread position: 172-448
Cow position: chr20:35145791-35146083 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 21, 276

Conread position: 172-448
Cow position: chr20:36779946-36779667 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 116, 88

Conread position: 173-448
Cow position: chr20:22704073-22704357 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 151

Conread position: 176-431
Cow position: chr20:3781639-3781377 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 20, 103

Conread position: 176-448
Cow position: chr20:11482351-11482072 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 149

Conread position: 176-448
Cow position: chr20:23065044-23064768 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 113

Conread position: 178-407
Cow position: chr20:8020685-8020919 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 84, 145

Conread position: 181-448
Cow position: chr20:38551167-38551434 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 63

Conread position: 185-448
Cow position: chr20:15566034-15565765 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 14, 165

Conread position: 190-448
Cow position: chr20:28067623-28067357 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 72, 95

Conread position: 195-420
Cow position: chr20:34107924-34108147 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 37

Conread position: 195-448
Cow position: chr20:6602849-6603103 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 65

Conread position: 195-448
Cow position: chr20:34098150-34097892 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 106, 64

Conread position: 201-436
Cow position: chr20:37165540-37165764 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 67

Conread position: 202-448
Cow position: chr20:7550056-7550300 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 60, 89

Conread position: 209-445
Cow position: chr20:37272538-37272774 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 28

Conread position: 217-448
Cow position: chr20:3321308-3321070 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 51

Conread position: 218-448
Cow position: chr20:28831794-28832033 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 107

Conread position: 220-446
Cow position: chr20:14100605-14100373 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 29

Conread position: 223-448
Cow position: chr20:41403405-41403639 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 80, 43

Conread position: 230-448
Cow position: chr20:15312502-15312732 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 32, 101

Conread position: 232-440
Cow position: chr20:34084915-34085120 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 31

Conread position: 232-448
Cow position: chr20:5636325-5636543 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 173
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 30, 91

Conread position: 232-448
Cow position: chr20:7623208-7623002 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 119, 25

Conread position: 233-441
Cow position: chr20:21761622-21761829 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 47, 26

Conread position: 234-446
Cow position: chr20:1575946-1576154 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 25

Conread position: 234-448
Cow position: chr20:13025761-13025552 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 18

Conread position: 240-448
Cow position: chr20:4334667-4334468 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 20

Conread position: 242-446
Cow position: chr20:14540207-14540404 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 61, 26

Conread position: 246-448
Cow position: chr20:22484719-22484925 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 22

Conread position: 272-448
Cow position: chr20:11188921-11188739 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 134

Conread position: 287-448
Cow position: chr20:23541257-23541095 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 39

Conread position: 287-448
Cow position: chr20:34901468-34901634 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 14, 33

Conread position: 293-448
Cow position: chr20:13794894-13795045 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 8, 49

Conread position: 301-446
Cow position: chr20:5078535-5078687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 139

Conread position: 301-448
Cow position: chr20:28594197-28594348 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 25

Conread position: 306-446
Cow position: chr20:16491991-16492132 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 14

Conread position: 312-447
Cow position: chr20:37357530-37357669 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 125

Conread position: 312-448
Cow position: chr20:35192701-35192834 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 87

Conread position: 313-430
Cow position: chr20:11498436-11498556 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 322-448
Cow position: chr20:23506536-23506408 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 113

Conread position: 334-448
Cow position: chr20:10772150-10772268 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 103

Show alignments to all cow chromosomes.