Cow genome map
| Conread name: | Ova1-OVRM10035D03 |
| Conread position: | 7-448 |
| Cow position: | chr21:23586535-23586965 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 79 |
| Conread position: | 8-420 |
| Cow position: | chr21:21143508-21143958 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 326 |
| Conread position: | 11-428 |
| Cow position: | chr21:39403892-39403471 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 155, 84 |
| Conread position: | 14-445 |
| Cow position: | chr21:2786114-2785696 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 110 |
| Conread position: | 25-448 |
| Cow position: | chr21:6102632-6102178 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 308 |
| Conread position: | 32-447 |
| Cow position: | chr21:24764964-24765364 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 71 |
| Conread position: | 53-448 |
| Cow position: | chr21:30607385-30607004 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 75 |
| Conread position: | 81-317 |
| Cow position: | chr21:24758789-24759023 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 82-448 |
| Cow position: | chr21:41597528-41597894 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 325 |
| Conread position: | 101-407 |
| Cow position: | chr21:37361748-37361434 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 174 |
| Conread position: | 105-447 |
| Cow position: | chr21:34159689-34160032 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 261 |
| Conread position: | 112-438 |
| Cow position: | chr21:31691225-31691558 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 112-448 |
| Cow position: | chr21:20262590-20262252 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 131-448 |
| Cow position: | chr21:10633892-10633554 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 70, 44 |
| Conread position: | 132-438 |
| Cow position: | chr21:36795369-36795676 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 132-448 |
| Cow position: | chr21:3817982-3818292 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 133-402 |
| Cow position: | chr21:33791602-33791328 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 134-448 |
| Cow position: | chr21:8206557-8206855 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 69, 107 |
| Conread position: | 134-448 |
| Cow position: | chr21:15976410-15976716 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 233 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 138-448 |
| Cow position: | chr21:4399569-4399886 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 142-448 |
| Cow position: | chr21:13897966-13898271 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 144-406 |
| Cow position: | chr21:393802-394061 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 144-445 |
| Cow position: | chr21:27743522-27743829 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 13 |
| Conread position: | 144-448 |
| Cow position: | chr21:33729214-33729513 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 229 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 57, 8 |
| Conread position: | 144-448 |
| Cow position: | chr21:41878257-41878554 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 152-448 |
| Cow position: | chr21:32237081-32237365 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 12, 58 |
| Conread position: | 154-447 |
| Cow position: | chr21:42500821-42501126 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 43, 7 |
| Conread position: | 154-448 |
| Cow position: | chr21:4282082-4281792 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 157-443 |
| Cow position: | chr21:19083808-19083521 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 116, 17 |
| Conread position: | 158-448 |
| Cow position: | chr21:15584613-15584336 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 44 |
| Conread position: | 159-438 |
| Cow position: | chr21:7709956-7710237 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 126 |
| Conread position: | 160-447 |
| Cow position: | chr21:33997428-33997145 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 160-448 |
| Cow position: | chr21:33514-33802 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 160-448 |
| Cow position: | chr21:5455189-5454908 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 219 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 141, 41 |
| Conread position: | 160-448 |
| Cow position: | chr21:26244727-26244997 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 161-448 |
| Cow position: | chr21:6713742-6713442 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 161-448 |
| Cow position: | chr21:30849145-30848858 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 68 |
| Conread position: | 161-448 |
| Cow position: | chr21:41620913-41621208 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 36, 164 |
| Conread position: | 163-404 |
| Cow position: | chr21:42905582-42905337 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 91 |
| Conread position: | 163-420 |
| Cow position: | chr21:40058602-40058864 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 99, 111 |
| Conread position: | 164-317 |
| Cow position: | chr21:23478922-23478768 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 164-448 |
| Cow position: | chr21:395673-395951 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 96 |
| Conread position: | 165-410 |
| Cow position: | chr21:46973330-46973086 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 165-431 |
| Cow position: | chr21:912168-911899 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 5 |
| Conread position: | 165-431 |
| Cow position: | chr21:15545565-15545300 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 136, 39 |
| Conread position: | 165-448 |
| Cow position: | chr21:3585558-3585285 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 20 |
| Conread position: | 165-448 |
| Cow position: | chr21:23322283-23321995 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 166-396 |
| Cow position: | chr21:48484642-48484416 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 166-405 |
| Cow position: | chr21:36793681-36793932 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 105 |
| Conread position: | 166-406 |
| Cow position: | chr21:24796239-24795997 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 166-431 |
| Cow position: | chr21:42913947-42913676 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 155 |
| Conread position: | 166-437 |
| Cow position: | chr21:21480380-21480112 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 166-443 |
| Cow position: | chr21:16696169-16696445 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 135, 43 |
| Conread position: | 166-443 |
| Cow position: | chr21:32535775-32536055 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 166-445 |
| Cow position: | chr21:19258625-19258902 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 166-446 |
| Cow position: | chr21:42384304-42384589 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 166-447 |
| Cow position: | chr21:5971037-5970756 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 166-447 |
| Cow position: | chr21:8549480-8549764 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 21 |
| Conread position: | 166-447 |
| Cow position: | chr21:23606473-23606754 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 130 |
| Conread position: | 166-448 |
| Cow position: | chr21:9416041-9416333 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 280 |
| Conread position: | 166-448 |
| Cow position: | chr21:10727080-10727360 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 100 |
| Conread position: | 166-448 |
| Cow position: | chr21:17511575-17511859 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 166-448 |
| Cow position: | chr21:20160483-20160759 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 94 |
| Conread position: | 166-448 |
| Cow position: | chr21:33983011-33982724 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 166-448 |
| Cow position: | chr21:39401399-39401676 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 136, 35 |
| Conread position: | 167-430 |
| Cow position: | chr21:14760380-14760640 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 167-437 |
| Cow position: | chr21:45330140-45329874 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 167-438 |
| Cow position: | chr21:42145716-42145992 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 32, 156 |
| Conread position: | 167-441 |
| Cow position: | chr21:35897821-35897563 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 169-442 |
| Cow position: | chr21:48176628-48176901 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 170-445 |
| Cow position: | chr21:23984481-23984200 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 158 |
| Conread position: | 170-448 |
| Cow position: | chr21:8985352-8985635 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 116 |
| Conread position: | 172-393 |
| Cow position: | chr21:34738403-34738638 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 172-446 |
| Cow position: | chr21:37345300-37345020 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 172-448 |
| Cow position: | chr21:20925701-20925422 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 211 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 90, 120 |
| Conread position: | 172-448 |
| Cow position: | chr21:26648199-26647925 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 90, 23 |
| Conread position: | 172-448 |
| Cow position: | chr21:28881947-28882221 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 172-448 |
| Cow position: | chr21:39888939-39888666 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 173-448 |
| Cow position: | chr21:31253341-31253620 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 28, 156 |
| Conread position: | 173-448 |
| Cow position: | chr21:31277627-31277893 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 175-448 |
| Cow position: | chr21:3813675-3813400 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 176-361 |
| Cow position: | chr21:13163702-13163887 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 176-407 |
| Cow position: | chr21:15445270-15445030 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 113 |
| Conread position: | 176-444 |
| Cow position: | chr21:38449643-38449366 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 176-446 |
| Cow position: | chr21:10263852-10264114 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 176-448 |
| Cow position: | chr21:5426755-5427023 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 23 |
| Conread position: | 176-448 |
| Cow position: | chr21:13738380-13738643 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 125, 25 |
| Conread position: | 176-448 |
| Cow position: | chr21:17643161-17642901 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 176-448 |
| Cow position: | chr21:18940748-18940493 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 177-424 |
| Cow position: | chr21:18494776-18495030 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 85, 146 |
| Conread position: | 178-438 |
| Cow position: | chr21:45915893-45915641 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 178-447 |
| Cow position: | chr21:5566800-5567069 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 24, 180 |
| Conread position: | 178-448 |
| Cow position: | chr21:13128280-13128013 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 123, 23 |
| Conread position: | 178-448 |
| Cow position: | chr21:28923937-28924192 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 178-448 |
| Cow position: | chr21:34391159-34390892 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 179-446 |
| Cow position: | chr21:1464040-1464311 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 97 |
| Conread position: | 179-446 |
| Cow position: | chr21:40589671-40589401 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 24, 144 |
| Conread position: | 179-448 |
| Cow position: | chr21:28989431-28989693 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 183-448 |
| Cow position: | chr21:17174956-17175230 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 207 |
| Conread position: | 189-444 |
| Cow position: | chr21:8235722-8235476 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 190-448 |
| Cow position: | chr21:18790733-18790479 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 10, 80 |
| Conread position: | 190-448 |
| Cow position: | chr21:33562838-33563091 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 192-448 |
| Cow position: | chr21:32339912-32339657 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 6, 69 |
| Conread position: | 198-448 |
| Cow position: | chr21:10000912-10001158 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 201-448 |
| Cow position: | chr21:18065089-18064831 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 216-437 |
| Cow position: | chr21:10823403-10823638 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 192 |
| Conread position: | 216-447 |
| Cow position: | chr21:45921209-45920976 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 219-448 |
| Cow position: | chr21:24642374-24642604 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 220-448 |
| Cow position: | chr21:10005032-10004802 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 223-431 |
| Cow position: | chr21:42007603-42007394 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 45 |
| Conread position: | 224-442 |
| Cow position: | chr21:39809757-39809971 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 78, 44 |
| Conread position: | 228-448 |
| Cow position: | chr21:957529-957756 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 228-448 |
| Cow position: | chr21:11250727-11250956 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 182 |
| Conread position: | 228-448 |
| Cow position: | chr21:11359899-11360119 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 69 |
| Conread position: | 228-448 |
| Cow position: | chr21:12462109-12461884 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 31 |
| Conread position: | 229-447 |
| Cow position: | chr21:20152810-20153038 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 230-446 |
| Cow position: | chr21:17875332-17875112 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 230-448 |
| Cow position: | chr21:29978899-29978677 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 96 |
| Conread position: | 230-448 |
| Cow position: | chr21:34736894-34737113 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 243-439 |
| Cow position: | chr21:18414926-18415127 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 244-448 |
| Cow position: | chr21:34722913-34722705 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 7, 83 |
| Conread position: | 246-446 |
| Cow position: | chr21:6997820-6998023 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 14 |
| Conread position: | 247-448 |
| Cow position: | chr21:25629031-25628827 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 262-431 |
| Cow position: | chr21:9980071-9979903 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 53 |
| Conread position: | 265-448 |
| Cow position: | chr21:30835260-30835448 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 275-437 |
| Cow position: | chr21:4568193-4568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 276-448 |
| Cow position: | chr21:10561675-10561500 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 287-448 |
| Cow position: | chr21:37014483-37014323 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 288-431 |
| Cow position: | chr21:47714086-47713937 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 291-448 |
| Cow position: | chr21:33360110-33359952 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 301-447 |
| Cow position: | chr21:22720162-22720310 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 312-442 |
| Cow position: | chr21:7391332-7391200 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 123 |
| Conread position: | 312-447 |
| Cow position: | chr21:977200-977066 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 93 |
| Conread position: | 312-448 |
| Cow position: | chr21:47363794-47363653 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 316-447 |
| Cow position: | chr21:28919576-28919441 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 14, 121 |
Show alignments to all cow chromosomes.