Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-140
Cow position: chr23:18367300-18367439 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 39

Conread position: 3-448
Cow position: chr23:6593105-6592678 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 7-396
Cow position: chr23:36198855-36199260 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 270

Conread position: 7-448
Cow position: chr23:1647229-1647640 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 309
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 294, 127

Conread position: 8-448
Cow position: chr23:36309028-36309442 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 62

Conread position: 8-448
Cow position: chr23:39775322-39775748 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 120

Conread position: 116-447
Cow position: chr23:26795218-26794892 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 125-448
Cow position: chr23:13555729-13555416 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 23

Conread position: 126-442
Cow position: chr23:808860-809180 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 5, 49

Conread position: 131-448
Cow position: chr23:4562589-4562907 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 74

Conread position: 139-446
Cow position: chr23:33711483-33711780 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 162, 31

Conread position: 140-448
Cow position: chr23:15287423-15287116 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 185

Conread position: 146-444
Cow position: chr23:29242661-29242967 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 181

Conread position: 146-447
Cow position: chr23:32309396-32309704 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 114

Conread position: 146-448
Cow position: chr23:5162146-5162455 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 15

Conread position: 146-448
Cow position: chr23:25675962-25675678 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 31

Conread position: 149-325
Cow position: chr23:666389-666215 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 9

Conread position: 149-448
Cow position: chr23:37065558-37065871 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 9

Conread position: 151-448
Cow position: chr23:2055426-2055726 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 14

Conread position: 152-446
Cow position: chr23:29346034-29345744 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 109, 13

Conread position: 157-447
Cow position: chr23:27862064-27862350 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 158-448
Cow position: chr23:14739183-14739464 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 14

Conread position: 160-442
Cow position: chr23:4726530-4726810 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 6, 50

Conread position: 160-448
Cow position: chr23:14164669-14164376 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 124

Conread position: 163-393
Cow position: chr23:344444-344208 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 161

Conread position: 163-445
Cow position: chr23:32105608-32105891 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 165, 32

Conread position: 163-448
Cow position: chr23:22804456-22804746 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 99

Conread position: 164-401
Cow position: chr23:7596598-7596356 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 67

Conread position: 164-447
Cow position: chr23:41472348-41472642 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 37

Conread position: 165-420
Cow position: chr23:13511469-13511724 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 36, 79

Conread position: 165-439
Cow position: chr23:16246480-16246746 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 65

Conread position: 165-442
Cow position: chr23:18367432-18367716 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 20

Conread position: 165-446
Cow position: chr23:10554275-10553989 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 165-446
Cow position: chr23:19002332-19002042 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 115, 276

Conread position: 165-447
Cow position: chr23:15710339-15710058 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 97, 11

Conread position: 166-365
Cow position: chr23:1640548-1640753 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 159

Conread position: 166-431
Cow position: chr23:33601783-33601521 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 21

Conread position: 166-440
Cow position: chr23:25669333-25669079 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 95

Conread position: 166-443
Cow position: chr23:1009664-1009385 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 36, 27

Conread position: 166-447
Cow position: chr23:8293238-8293522 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 36, 143

Conread position: 166-447
Cow position: chr23:40778000-40778286 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 158

Conread position: 166-448
Cow position: chr23:1924096-1923815 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 33

Conread position: 166-448
Cow position: chr23:3247325-3247608 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 94

Conread position: 166-448
Cow position: chr23:21336752-21336462 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 95

Conread position: 168-445
Cow position: chr23:4968780-4968505 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 60

Conread position: 168-446
Cow position: chr23:39752853-39753136 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 157

Conread position: 169-448
Cow position: chr23:1803534-1803808 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 32

Conread position: 170-447
Cow position: chr23:25864941-25864679 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 131, 30

Conread position: 170-448
Cow position: chr23:3262758-3262475 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 81

Conread position: 170-448
Cow position: chr23:38455444-38455157 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 74

Conread position: 171-448
Cow position: chr23:20057125-20056842 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 89

Conread position: 172-314
Cow position: chr23:35366355-35366212 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 88

Conread position: 172-314
Cow position: chr23:35369267-35369124 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 107, 88

Conread position: 172-445
Cow position: chr23:587138-587411 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 153

Conread position: 172-447
Cow position: chr23:4608639-4608361 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 131

Conread position: 173-428
Cow position: chr23:10014289-10014543 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 55

Conread position: 173-438
Cow position: chr23:7402450-7402715 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 97

Conread position: 176-448
Cow position: chr23:1670664-1670924 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 199
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 154, 83

Conread position: 176-448
Cow position: chr23:9595082-9594811 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 55

Conread position: 176-448
Cow position: chr23:19979201-19978932 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 150

Conread position: 176-448
Cow position: chr23:26632547-26632826 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 147

Conread position: 176-448
Cow position: chr23:27563962-27563679 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 25, 110

Conread position: 176-448
Cow position: chr23:38503379-38503084 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 137

Conread position: 177-438
Cow position: chr23:38854986-38854723 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 24, 47

Conread position: 181-448
Cow position: chr23:18402534-18402268 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 204
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 85

Conread position: 184-448
Cow position: chr23:16700284-16700020 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 14, 70

Conread position: 185-448
Cow position: chr23:13599098-13599364 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 83

Conread position: 187-446
Cow position: chr23:2417213-2417470 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 96

Conread position: 187-448
Cow position: chr23:1885418-1885151 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 138

Conread position: 188-446
Cow position: chr23:24704033-24704304 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 142

Conread position: 192-445
Cow position: chr23:1503221-1503462 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 21, 78

Conread position: 192-448
Cow position: chr23:27544595-27544849 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 69

Conread position: 193-431
Cow position: chr23:14189794-14189556 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 18

Conread position: 194-448
Cow position: chr23:25378421-25378671 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 197
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 79, 41

Conread position: 195-415
Cow position: chr23:25189106-25189336 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 38

Conread position: 195-444
Cow position: chr23:35254471-35254227 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 72

Conread position: 195-446
Cow position: chr23:6223767-6223997 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 106, 65

Conread position: 195-447
Cow position: chr23:5603504-5603264 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 65

Conread position: 195-448
Cow position: chr23:15742866-15743113 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 106, 58

Conread position: 204-448
Cow position: chr23:5723319-5723567 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 81

Conread position: 210-447
Cow position: chr23:1068531-1068295 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 91, 58

Conread position: 218-448
Cow position: chr23:1742147-1742379 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 83, 40

Conread position: 219-444
Cow position: chr23:39028575-39028798 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 51

Conread position: 223-445
Cow position: chr23:4942308-4942092 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 36

Conread position: 225-431
Cow position: chr23:5191301-5191092 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 35

Conread position: 230-448
Cow position: chr23:30999377-30999593 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 32, 100

Conread position: 234-447
Cow position: chr23:19371265-19371054 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 28

Conread position: 238-448
Cow position: chr23:34356443-34356664 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 167

Conread position: 266-448
Cow position: chr23:1921390-1921205 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 170

Conread position: 270-446
Cow position: chr23:23113870-23114052 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 169

Conread position: 275-446
Cow position: chr23:4966666-4966841 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 47

Conread position: 275-448
Cow position: chr23:1767676-1767850 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 45

Conread position: 277-448
Cow position: chr23:5436794-5436621 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 7

Conread position: 279-447
Cow position: chr23:35942065-35942234 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 42

Conread position: 291-448
Cow position: chr23:33622290-33622128 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 150

Conread position: 293-448
Cow position: chr23:30950824-30950976 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 27

Conread position: 297-441
Cow position: chr23:5745046-5745190 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 23

Conread position: 301-448
Cow position: chr23:9713189-9713344 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 140

Conread position: 312-444
Cow position: chr23:1655777-1655912 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 123

Conread position: 312-448
Cow position: chr23:3245033-3244892 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 129

Show alignments to all cow chromosomes.