Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-447
Cow position:
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 1-448
Cow position:
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 148

Conread position: 1-448
Cow position:
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 3-445
Cow position:
Alignm length: 463
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 4-445
Cow position:
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 230

Conread position: 7-448
Cow position:
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 38

Conread position: 8-447
Cow position:
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 17

Conread position: 8-447
Cow position:
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 31

Conread position: 12-448
Cow position:
Alignm length: 449
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 114

Conread position: 44-442
Cow position:
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 61

Conread position: 56-448
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 66

Conread position: 58-448
Cow position:
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 92

Conread position: 69-445
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 70

Conread position: 88-402
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 17

Conread position: 88-442
Cow position:
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 112-445
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 22

Conread position: 133-396
Cow position:
Alignm length: 273
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 203

Conread position: 133-448
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 31

Conread position: 134-390
Cow position:
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 108

Conread position: 138-448
Cow position:
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 144-448
Cow position:
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 8

Conread position: 148-446
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 74

Conread position: 149-448
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 210

Conread position: 150-446
Cow position:
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 52

Conread position: 150-448
Cow position:
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 61

Conread position: 158-445
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 7

Conread position: 161-416
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 26

Conread position: 161-445
Cow position:
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 161-446
Cow position:
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 161-448
Cow position:
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 140, 13

Conread position: 162-384
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 36, 15

Conread position: 163-448
Cow position:
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 129

Conread position: 163-448
Cow position:
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 30

Conread position: 163-448
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 25

Conread position: 165-382
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 41

Conread position: 165-402
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 105

Conread position: 165-446
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 97, 66

Conread position: 165-448
Cow position:
Alignm length: 296
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 36

Conread position: 165-448
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 121

Conread position: 165-448
Cow position:
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 165-448
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 108

Conread position: 165-448
Cow position:
Alignm length: 291
Alignm identity: 216
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 30, 97

Conread position: 166-302
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 166-381
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 68

Conread position: 166-390
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 103

Conread position: 166-406
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 134

Conread position: 166-407
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 96

Conread position: 166-439
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 19

Conread position: 166-445
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 61

Conread position: 166-445
Cow position:
Alignm length: 286
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 73

Conread position: 166-446
Cow position:
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 166-448
Cow position:
Alignm length: 286
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 49

Conread position: 166-448
Cow position:
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 166-448
Cow position:
Alignm length: 292
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 111, 50

Conread position: 166-448
Cow position:
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 94

Conread position: 167-448
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 101

Conread position: 168-442
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 163

Conread position: 169-448
Cow position:
Alignm length: 295
Alignm identity: 220
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 27, 121

Conread position: 170-447
Cow position:
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 170-448
Cow position:
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 90

Conread position: 171-444
Cow position:
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 90

Conread position: 172-445
Cow position:
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 173-447
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 76

Conread position: 176-427
Cow position:
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 25

Conread position: 176-444
Cow position:
Alignm length: 277
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 87

Conread position: 176-448
Cow position:
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 85

Conread position: 179-390
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 179-446
Cow position:
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 181-448
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 20

Conread position: 181-448
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 25

Conread position: 185-448
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 75

Conread position: 187-430
Cow position:
Alignm length: 253
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 25

Conread position: 195-448
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 67, 234

Conread position: 201-431
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 100, 65

Conread position: 201-448
Cow position:
Alignm length: 257
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 46

Conread position: 215-448
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 45

Conread position: 228-448
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 95

Conread position: 233-433
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 32

Conread position: 236-448
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 24

Conread position: 239-448
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 29

Conread position: 241-448
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 44

Conread position: 242-448
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 199

Conread position: 247-448
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 76

Conread position: 251-446
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 72

Conread position: 251-448
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 25

Conread position: 263-431
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 66

Conread position: 264-448
Cow position:
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 20

Conread position: 270-448
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 17

Conread position: 275-439
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 127

Conread position: 287-443
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 34

Conread position: 295-446
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 6, 29

Conread position: 302-444
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 18

Conread position: 326-447
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 22

Conread position: 329-448
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 67

Conread position: 330-448
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 351-448
Cow position:
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.