Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-447
Cow position: chr24:30545302-30544868 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 119

Conread position: 1-448
Cow position: chr24:8886465-8886905 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 148

Conread position: 1-448
Cow position: chr24:43432362-43432785 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 3-445
Cow position: chr24:18331270-18331710 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 4-445
Cow position: chr24:40184159-40184616 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 230

Conread position: 7-448
Cow position: chr24:33943984-33944396 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 38

Conread position: 8-447
Cow position: chr24:8814424-8814009 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 17

Conread position: 8-447
Cow position: chr24:18970919-18970515 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 31

Conread position: 12-448
Cow position: chr24:40129701-40130124 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 114

Conread position: 44-442
Cow position: chr24:24137239-24136872 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 61

Conread position: 56-448
Cow position: chr24:6102442-6102825 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 66

Conread position: 58-448
Cow position: chr24:31159235-31159614 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 92

Conread position: 69-445
Cow position: chr24:18695238-18695611 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 70

Conread position: 88-402
Cow position: chr24:6450147-6450446 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 17

Conread position: 88-442
Cow position: chr24:17955820-17955455 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 17

Conread position: 112-445
Cow position: chr24:3631173-3631495 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 234
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 22

Conread position: 133-396
Cow position: chr24:11118957-11119228 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 24, 203

Conread position: 133-448
Cow position: chr24:29170644-29170958 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 63, 31

Conread position: 134-390
Cow position: chr24:6677181-6677449 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 108

Conread position: 138-448
Cow position: chr24:35795055-35794740 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 21

Conread position: 144-448
Cow position: chr24:28553853-28553559 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 8

Conread position: 148-446
Cow position: chr24:28721580-28721882 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 74

Conread position: 149-448
Cow position: chr24:29679620-29679315 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 210

Conread position: 150-446
Cow position: chr24:24755149-24755440 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 52

Conread position: 150-448
Cow position: chr24:34396464-34396184 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 24, 61

Conread position: 158-445
Cow position: chr24:15861897-15861606 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 7

Conread position: 161-416
Cow position: chr24:40056012-40055766 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 40, 26

Conread position: 161-445
Cow position: chr24:27267343-27267619 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 13

Conread position: 161-446
Cow position: chr24:11839886-11840180 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 13

Conread position: 161-448
Cow position: chr24:27290585-27290866 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 140, 13

Conread position: 162-384
Cow position: chr24:11006923-11007151 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 36, 15

Conread position: 163-448
Cow position: chr24:18485292-18484999 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 129

Conread position: 163-448
Cow position: chr24:27052784-27052499 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 30

Conread position: 163-448
Cow position: chr24:29388958-29389226 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 25

Conread position: 165-382
Cow position: chr24:38374995-38375214 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 41

Conread position: 165-402
Cow position: chr24:27809891-27810136 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 105

Conread position: 165-446
Cow position: chr24:36486349-36486072 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 97, 66

Conread position: 165-448
Cow position: chr24:18405594-18405316 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 36

Conread position: 165-448
Cow position: chr24:18741861-18741577 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 121

Conread position: 165-448
Cow position: chr24:29596101-29595814 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 165-448
Cow position: chr24:32205086-32204800 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 22, 108

Conread position: 165-448
Cow position: chr24:32370201-32369922 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 30, 97

Conread position: 166-302
Cow position: chr24:27763513-27763649 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 166-381
Cow position: chr24:18734649-18734423 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 68

Conread position: 166-390
Cow position: chr24:20970081-20969862 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 103

Conread position: 166-406
Cow position: chr24:814554-814318 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 35, 134

Conread position: 166-407
Cow position: chr24:44041299-44041057 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 96

Conread position: 166-439
Cow position: chr24:35572198-35572472 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 19

Conread position: 166-445
Cow position: chr24:6160373-6160097 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 61

Conread position: 166-445
Cow position: chr24:27720041-27719768 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 73

Conread position: 166-446
Cow position: chr24:3493604-3493877 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 166-448
Cow position: chr24:19535533-19535261 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 31, 49

Conread position: 166-448
Cow position: chr24:32054382-32054656 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 166-448
Cow position: chr24:36555117-36554838 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 111, 50

Conread position: 166-448
Cow position: chr24:42007457-42007735 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 94

Conread position: 167-448
Cow position: chr24:43635147-43635433 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 101

Conread position: 168-442
Cow position: chr24:27906141-27906426 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 163

Conread position: 169-448
Cow position: chr24:30229180-30229468 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 27, 121

Conread position: 170-447
Cow position: chr24:40849878-40850156 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 170-448
Cow position: chr24:30484228-30483953 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 90

Conread position: 171-444
Cow position: chr24:17567106-17567376 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 90

Conread position: 172-445
Cow position: chr24:35073809-35074085 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 173-447
Cow position: chr24:35986001-35985736 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 76

Conread position: 176-427
Cow position: chr24:12851454-12851688 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 25

Conread position: 176-444
Cow position: chr24:27874323-27874586 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 25, 87

Conread position: 176-448
Cow position: chr24:43364084-43364356 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 85

Conread position: 179-390
Cow position: chr24:18324339-18324559 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 179-446
Cow position: chr24:19769222-19769482 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 181-448
Cow position: chr24:17363919-17363653 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 100, 20

Conread position: 181-448
Cow position: chr24:18390562-18390297 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 25

Conread position: 185-448
Cow position: chr24:16994624-16994876 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 75

Conread position: 187-430
Cow position: chr24:5151967-5152214 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 25

Conread position: 195-448
Cow position: chr24:27039779-27040043 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 67, 234

Conread position: 201-431
Cow position: chr24:27207448-27207216 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 100, 65

Conread position: 201-448
Cow position: chr24:26732194-26732446 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 46

Conread position: 215-448
Cow position: chr24:33222179-33221945 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 45

Conread position: 228-448
Cow position: chr24:24457473-24457255 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 73, 95

Conread position: 233-433
Cow position: chr24:16509751-16509951 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 68, 32

Conread position: 236-448
Cow position: chr24:33465819-33465623 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 24

Conread position: 239-448
Cow position: chr24:15373194-15373400 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 29

Conread position: 241-448
Cow position: chr24:5911-5703 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 44

Conread position: 242-448
Cow position: chr24:34008793-34008578 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 31, 199

Conread position: 247-448
Cow position: chr24:16089025-16089223 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 15, 76

Conread position: 251-446
Cow position: chr24:14171900-14171696 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 72

Conread position: 251-448
Cow position: chr24:34782990-34782793 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 25

Conread position: 263-431
Cow position: chr24:40983969-40984142 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 17, 66

Conread position: 264-448
Cow position: chr24:16895625-16895442 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 38, 20

Conread position: 270-448
Cow position: chr24:17832997-17832820 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 31, 17

Conread position: 275-439
Cow position: chr24:30226760-30226928 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 127

Conread position: 287-443
Cow position: chr24:35576703-35576545 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 34

Conread position: 295-446
Cow position: chr24:27552735-27552887 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 6, 29

Conread position: 302-444
Cow position: chr24:17127372-17127515 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 18

Conread position: 326-447
Cow position: chr24:27418227-27418104 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 72, 22

Conread position: 329-448
Cow position: chr24:39523573-39523454 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 67

Conread position: 330-448
Cow position: chr24:6957382-6957496 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 351-448
Cow position: chr24:16895232-16895136 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 0

Show alignments to all cow chromosomes.