Cow genome map
| Conread name: | Ova1-OVRM10035D03 |
| Conread position: | 1-447 |
| Cow position: | chr25:28188385-28187929 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 124 |
| Conread position: | 4-448 |
| Cow position: | chr25:20007725-20008149 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 7 |
| Conread position: | 5-355 |
| Cow position: | chr25:14266924-14266580 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 7-448 |
| Cow position: | chr25:12081747-12081303 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 231 |
| Conread position: | 7-448 |
| Cow position: | chr25:35612727-35612296 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 279 |
| Conread position: | 8-445 |
| Cow position: | chr25:12824422-12824003 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 123 |
| Conread position: | 9-448 |
| Cow position: | chr25:11585121-11585535 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 72 |
| Conread position: | 40-445 |
| Cow position: | chr25:4002413-4002816 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 55 |
| Conread position: | 81-440 |
| Cow position: | chr25:35344686-35345040 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 51 |
| Conread position: | 112-448 |
| Cow position: | chr25:20069402-20069738 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 116-445 |
| Cow position: | chr25:35625491-35625170 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 6 |
| Conread position: | 136-448 |
| Cow position: | chr25:9957327-9957021 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 140-448 |
| Cow position: | chr25:33978492-33978200 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 232 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 144-448 |
| Cow position: | chr25:21895172-21894867 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 151-448 |
| Cow position: | chr25:40321576-40321270 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 26, 176 |
| Conread position: | 153-448 |
| Cow position: | chr25:21266726-21267008 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 112 |
| Conread position: | 158-439 |
| Cow position: | chr25:13642590-13642302 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 7 |
| Conread position: | 159-448 |
| Cow position: | chr25:14196581-14196880 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 166 |
| Conread position: | 161-402 |
| Cow position: | chr25:10366022-10365781 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 161-431 |
| Cow position: | chr25:14225065-14224802 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 13 |
| Conread position: | 161-448 |
| Cow position: | chr25:25827193-25827488 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 34 |
| Conread position: | 162-448 |
| Cow position: | chr25:9349528-9349264 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 37, 99 |
| Conread position: | 164-407 |
| Cow position: | chr25:6424856-6424610 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 165-443 |
| Cow position: | chr25:27821144-27821422 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 165-445 |
| Cow position: | chr25:13569435-13569158 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 165-448 |
| Cow position: | chr25:7641721-7641434 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 165-448 |
| Cow position: | chr25:20785849-20785569 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 137, 36 |
| Conread position: | 165-448 |
| Cow position: | chr25:26654639-26654929 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 122 |
| Conread position: | 166-395 |
| Cow position: | chr25:9634653-9634870 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 166-406 |
| Cow position: | chr25:12204203-12204445 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 95 |
| Conread position: | 166-437 |
| Cow position: | chr25:3145579-3145852 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 35, 59 |
| Conread position: | 166-437 |
| Cow position: | chr25:22203957-22203678 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 166-443 |
| Cow position: | chr25:21245873-21245592 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 119 |
| Conread position: | 166-444 |
| Cow position: | chr25:36779229-36779514 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 60 |
| Conread position: | 166-445 |
| Cow position: | chr25:788002-788278 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 209 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 66 |
| Conread position: | 166-445 |
| Cow position: | chr25:5514740-5515028 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 96, 158 |
| Conread position: | 166-446 |
| Cow position: | chr25:38981846-38982113 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 136, 38 |
| Conread position: | 166-448 |
| Cow position: | chr25:4522084-4521820 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 164, 34 |
| Conread position: | 166-448 |
| Cow position: | chr25:9023378-9023650 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 36, 54 |
| Conread position: | 166-448 |
| Cow position: | chr25:14791486-14791774 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 166-448 |
| Cow position: | chr25:16922059-16921780 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 166-448 |
| Cow position: | chr25:17658348-17658628 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 69 |
| Conread position: | 167-448 |
| Cow position: | chr25:10407684-10407400 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 34, 158 |
| Conread position: | 167-448 |
| Cow position: | chr25:16064631-16064909 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 93 |
| Conread position: | 168-443 |
| Cow position: | chr25:26058320-26058597 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 156 |
| Conread position: | 168-443 |
| Cow position: | chr25:36761841-36762117 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 101 |
| Conread position: | 168-448 |
| Cow position: | chr25:9396190-9396462 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 172-445 |
| Cow position: | chr25:9961439-9961159 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 154 |
| Conread position: | 172-448 |
| Cow position: | chr25:1837979-1838254 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 172-448 |
| Cow position: | chr25:26700779-26701047 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 172-448 |
| Cow position: | chr25:36535693-36535416 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 29 |
| Conread position: | 176-438 |
| Cow position: | chr25:8918535-8918269 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 176-442 |
| Cow position: | chr25:16001778-16001514 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 176-445 |
| Cow position: | chr25:7581684-7581417 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 86, 147 |
| Conread position: | 178-439 |
| Cow position: | chr25:36081619-36081885 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 179-420 |
| Cow position: | chr25:36026753-36026998 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 179-448 |
| Cow position: | chr25:2194693-2194949 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 180-393 |
| Cow position: | chr25:16400503-16400300 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 21, 75 |
| Conread position: | 180-396 |
| Cow position: | chr25:395102-395318 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 56 |
| Conread position: | 180-442 |
| Cow position: | chr25:27531520-27531268 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 189-417 |
| Cow position: | chr25:20394959-20395179 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 191-416 |
| Cow position: | chr25:22369151-22369377 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 87 |
| Conread position: | 192-448 |
| Cow position: | chr25:12840958-12840701 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 138, 68 |
| Conread position: | 193-401 |
| Cow position: | chr25:26112035-26112240 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 110, 70 |
| Conread position: | 195-446 |
| Cow position: | chr25:38425128-38425376 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 155, 73 |
| Conread position: | 195-448 |
| Cow position: | chr25:15377096-15377344 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 198-393 |
| Cow position: | chr25:6256172-6255974 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 216-446 |
| Cow position: | chr25:26090028-26089798 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 221-445 |
| Cow position: | chr25:13736522-13736299 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 102 |
| Conread position: | 228-448 |
| Cow position: | chr25:17704545-17704761 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 231-448 |
| Cow position: | chr25:27801089-27801299 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 236-448 |
| Cow position: | chr25:21042191-21042403 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 237-446 |
| Cow position: | chr25:12755686-12755472 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 239-393 |
| Cow position: | chr25:35110323-35110163 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 239-442 |
| Cow position: | chr25:3982851-3983051 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 65 |
| Conread position: | 243-448 |
| Cow position: | chr25:18905692-18905902 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 249-445 |
| Cow position: | chr25:23323019-23323214 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 250-442 |
| Cow position: | chr25:36138820-36138638 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 271-448 |
| Cow position: | chr25:21893178-21893355 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 286-445 |
| Cow position: | chr25:32588026-32587864 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 287-448 |
| Cow position: | chr25:22332616-22332782 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 116 |
| Conread position: | 290-448 |
| Cow position: | chr25:22730690-22730846 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 291-448 |
| Cow position: | chr25:24651593-24651436 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 291-448 |
| Cow position: | chr25:30618924-30619081 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 313-447 |
| Cow position: | chr25:24504618-24504483 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 121 |
Show alignments to all cow chromosomes.