Cow genome map


           Conread name:
           Ova1-OVRM10035D03
        

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 123
               

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 129
               

               Conread position:
               7-394
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 101
               

               Conread position:
               23-448
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 37
               

               Conread position:
               27-448
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               61-431
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 62
               

               Conread position:
               74-448
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 192
               

               Conread position:
               109-442
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               133-448
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               142-445
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               146-448
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               156, 55
               

               Conread position:
               150-448
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               151-448
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 13
               

               Conread position:
               157-448
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 19
               

               Conread position:
               159-445
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               37, 172
               

               Conread position:
               159-448
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               160-431
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 16
               

               Conread position:
               162-446
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               163-395
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               163-448
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               38, 99
               

               Conread position:
               164-431
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 72
               

               Conread position:
               165-446
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               165-446
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               101, 165
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 160
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 159
               

               Conread position:
               166-346
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               166-380
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               166-384
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               30, 159
               

               Conread position:
               166-403
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               130, 94
               

               Conread position:
               166-430
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               96, 239
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               11, 90
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 157
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 159
               

               Conread position:
               167-448
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               167-448
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               30, 156
               

               Conread position:
               167-448
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               171-448
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               159, 30
               

               Conread position:
               172-405
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               30, 123
               

               Conread position:
               172-448
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               29, 266
               

               Conread position:
               174-425
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               175-448
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               176-429
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 81
               

               Conread position:
               177-448
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 128
               

               Conread position:
               184-448
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 101
               

               Conread position:
               187-448
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               191-448
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               110, 69
               

               Conread position:
               195-448
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 54
               

               Conread position:
               201-448
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               217-443
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               114, 43
               

               Conread position:
               223-447
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               39, 214
               

               Conread position:
               227-405
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               227-445
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               232-446
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               235-443
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               236-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               26, 49
               

               Conread position:
               243-444
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               19, 198
               

               Conread position:
               271-443
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               275-448
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 165
               

               Conread position:
               287-444
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               291-445
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 149
               

               Conread position:
               291-448
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               313-446
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               23, 88
               
Show alignments to all cow chromosomes.