Cow genome map
| Conread name: | Ova1-OVRM10035D03 |
| Conread position: | 1-448 |
| Cow position: | chr26:614072-613639 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 3-448 |
| Cow position: | chr26:9604162-9604598 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 7-394 |
| Cow position: | chr26:1329151-1329526 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 101 |
| Conread position: | 23-448 |
| Cow position: | chr26:8810736-8811163 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 37 |
| Conread position: | 27-448 |
| Cow position: | chr26:20013076-20013514 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 61-431 |
| Cow position: | chr26:26294529-26294172 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 62 |
| Conread position: | 74-448 |
| Cow position: | chr26:16921598-16921974 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 192 |
| Conread position: | 109-442 |
| Cow position: | chr26:9666713-9666376 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 133-448 |
| Cow position: | chr26:3182229-3181903 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 37 |
| Conread position: | 142-445 |
| Cow position: | chr26:14958285-14957986 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 146-448 |
| Cow position: | chr26:33011927-33011632 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 156, 55 |
| Conread position: | 150-448 |
| Cow position: | chr26:798562-798262 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 52, 68 |
| Conread position: | 151-448 |
| Cow position: | chr26:4854275-4854581 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 157-448 |
| Cow position: | chr26:10768156-10767876 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 19 |
| Conread position: | 159-445 |
| Cow position: | chr26:20846368-20846657 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 37, 172 |
| Conread position: | 159-448 |
| Cow position: | chr26:29332845-29333129 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 70 |
| Conread position: | 160-431 |
| Cow position: | chr26:23097430-23097160 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 162-446 |
| Cow position: | chr26:32553431-32553720 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 163-395 |
| Cow position: | chr26:32026611-32026383 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 163-448 |
| Cow position: | chr26:12155362-12155085 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 164-431 |
| Cow position: | chr26:16796482-16796209 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 72 |
| Conread position: | 165-446 |
| Cow position: | chr26:27077-26801 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 165-446 |
| Cow position: | chr26:32058404-32058686 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 101, 165 |
| Conread position: | 165-448 |
| Cow position: | chr26:2531423-2531146 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 165-448 |
| Cow position: | chr26:8352710-8353005 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 160 |
| Conread position: | 165-448 |
| Cow position: | chr26:11263388-11263677 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 166-346 |
| Cow position: | chr26:26670990-26670814 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 54 |
| Conread position: | 166-380 |
| Cow position: | chr26:22831044-22830825 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 45 |
| Conread position: | 166-384 |
| Cow position: | chr26:13270926-13270701 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 30, 159 |
| Conread position: | 166-403 |
| Cow position: | chr26:18231119-18231358 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 130, 94 |
| Conread position: | 166-430 |
| Cow position: | chr26:31889842-31890111 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 96, 239 |
| Conread position: | 166-447 |
| Cow position: | chr26:11134944-11134652 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 66 |
| Conread position: | 166-447 |
| Cow position: | chr26:21418701-21418417 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 166-448 |
| Cow position: | chr26:4585458-4585174 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 38, 157 |
| Conread position: | 166-448 |
| Cow position: | chr26:16549732-16550020 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 159 |
| Conread position: | 167-448 |
| Cow position: | chr26:32013383-32013669 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 167-448 |
| Cow position: | chr26:32601104-32601386 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 30, 156 |
| Conread position: | 167-448 |
| Cow position: | chr26:32776753-32776470 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 29, 70 |
| Conread position: | 171-448 |
| Cow position: | chr26:33567284-33567008 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 211 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 159, 30 |
| Conread position: | 172-405 |
| Cow position: | chr26:19459430-19459677 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 172-448 |
| Cow position: | chr26:8700292-8700011 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 29, 266 |
| Conread position: | 174-425 |
| Cow position: | chr26:21351448-21351704 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 175-448 |
| Cow position: | chr26:34108532-34108795 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 37 |
| Conread position: | 176-429 |
| Cow position: | chr26:23926216-23925967 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 177-448 |
| Cow position: | chr26:31779237-31779518 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 128 |
| Conread position: | 184-448 |
| Cow position: | chr26:21242874-21243138 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 101 |
| Conread position: | 187-448 |
| Cow position: | chr26:21991885-21992138 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 191-448 |
| Cow position: | chr26:15200739-15200477 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 110, 69 |
| Conread position: | 195-448 |
| Cow position: | chr26:8642740-8642984 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 135, 54 |
| Conread position: | 201-448 |
| Cow position: | chr26:10764007-10764248 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 124 |
| Conread position: | 217-443 |
| Cow position: | chr26:20448775-20448993 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 223-447 |
| Cow position: | chr26:32672630-32672402 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 39, 214 |
| Conread position: | 227-405 |
| Cow position: | chr26:6252661-6252845 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 227-445 |
| Cow position: | chr26:6723918-6724138 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 232-446 |
| Cow position: | chr26:27761830-27761622 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 30, 55 |
| Conread position: | 235-443 |
| Cow position: | chr26:34060155-34060364 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 236-448 |
| Cow position: | chr26:22354236-22354449 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 243-444 |
| Cow position: | chr26:22249652-22249445 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 19, 198 |
| Conread position: | 271-443 |
| Cow position: | chr26:8820006-8819827 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 275-448 |
| Cow position: | chr26:31633587-31633764 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 165 |
| Conread position: | 287-444 |
| Cow position: | chr26:7315229-7315075 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 291-445 |
| Cow position: | chr26:33253444-33253283 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 10, 149 |
| Conread position: | 291-448 |
| Cow position: | chr26:14905934-14905772 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 313-446 |
| Cow position: | chr26:4807460-4807592 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 88 |
Show alignments to all cow chromosomes.