Cow genome map


           Conread name:
           Ova1-OVRM10035D03
        

               Conread position:
               11-448
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 51
               

               Conread position:
               62-448
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 154
               

               Conread position:
               81-447
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               131-398
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               73, 94
               

               Conread position:
               133-402
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               140-448
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 25
               

               Conread position:
               146-444
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 12
               

               Conread position:
               146-448
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 146
               

               Conread position:
               148-443
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               149-442
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 14
               

               Conread position:
               158-446
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 101
               

               Conread position:
               160-415
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               160-444
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               6, 58
               

               Conread position:
               160-446
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               37, 138
               

               Conread position:
               162-399
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               6, 34
               

               Conread position:
               162-446
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               165-386
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               20, 126
               

               Conread position:
               165-436
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 105
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 95
               

               Conread position:
               166-400
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               166-429
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 117
               

               Conread position:
               166-437
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               32, 120
               

               Conread position:
               166-440
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 126
               

               Conread position:
               166-442
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               34, 73
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 159
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               35, 21
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 160
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               120, 43
               

               Conread position:
               167-346
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               95, 124
               

               Conread position:
               167-446
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               134, 102
               

               Conread position:
               167-446
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               167-447
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               168-448
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 155
               

               Conread position:
               171-448
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               172-431
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               172-439
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               29, 90
               

               Conread position:
               172-439
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               172-445
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               172-447
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 152
               

               Conread position:
               173-348
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               128, 27
               

               Conread position:
               174-448
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               176-413
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               125, 84
               

               Conread position:
               176-435
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 149
               

               Conread position:
               176-447
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               178-376
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 117
               

               Conread position:
               178-446
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 85
               

               Conread position:
               181-416
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               182-448
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 89
               

               Conread position:
               188-448
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               189-446
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               7, 72
               

               Conread position:
               190-406
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               193-448
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               108, 78
               

               Conread position:
               195-448
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               91, 63
               

               Conread position:
               196-401
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               196-448
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               14, 98
               

               Conread position:
               198-445
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               103, 62
               

               Conread position:
               207-447
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               55, 97
               

               Conread position:
               216-444
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 44
               

               Conread position:
               218-445
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               44, 105
               

               Conread position:
               219-448
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               227-431
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               228-442
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               255-448
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 29
               

               Conread position:
               255-448
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               262-448
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               262-448
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 153
               

               Conread position:
               265-448
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               23, 179
               

               Conread position:
               279-448
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               284-446
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               287-446
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               287-448
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               287-448
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               15, 150
               

               Conread position:
               291-447
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 153
               

               Conread position:
               292-448
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 146
               

               Conread position:
               314-445
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               319-448
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               330-446
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               17, 50
               
Show alignments to all cow chromosomes.