Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-448
Cow position: chr28:23793712-23793287 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 158

Conread position: 8-396
Cow position: chr28:24997019-24996616 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 85

Conread position: 8-448
Cow position: chr28:20408997-20409416 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 110

Conread position: 25-438
Cow position: chr28:26718964-26719357 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 28

Conread position: 74-448
Cow position: chr28:25249005-25249378 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 47, 21

Conread position: 99-446
Cow position: chr28:4841726-4841371 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 24, 88

Conread position: 125-448
Cow position: chr28:8408437-8408758 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 20

Conread position: 130-448
Cow position: chr28:26922661-26922344 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 160

Conread position: 132-448
Cow position: chr28:7268232-7267919 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 103

Conread position: 142-448
Cow position: chr28:23675859-23676162 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 144-430
Cow position: chr28:7590461-7590174 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 8

Conread position: 144-443
Cow position: chr28:25399609-25399891 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 17, 10

Conread position: 146-446
Cow position: chr28:19026282-19025983 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 108

Conread position: 150-445
Cow position: chr28:5773366-5773657 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 52

Conread position: 155-448
Cow position: chr28:25806321-25806597 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 221
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 147, 19

Conread position: 157-448
Cow position: chr28:16204598-16204310 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 48, 36

Conread position: 157-448
Cow position: chr28:16253121-16252832 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 158-448
Cow position: chr28:6861689-6861978 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 7

Conread position: 161-446
Cow position: chr28:23410589-23410303 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 161-448
Cow position: chr28:4308160-4307873 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 13

Conread position: 162-438
Cow position: chr28:22170981-22170695 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 116

Conread position: 162-446
Cow position: chr28:26103452-26103728 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 8, 15

Conread position: 163-448
Cow position: chr28:616141-616410 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 65

Conread position: 163-448
Cow position: chr28:26684855-26685141 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 13

Conread position: 164-448
Cow position: chr28:11786969-11786694 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 96

Conread position: 165-436
Cow position: chr28:6577395-6577654 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 86

Conread position: 165-448
Cow position: chr28:5826688-5826974 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 96

Conread position: 165-448
Cow position: chr28:15007901-15008186 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 31, 98

Conread position: 165-448
Cow position: chr28:23007988-23007706 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 36, 98

Conread position: 166-315
Cow position: chr28:16211356-16211201 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 166-427
Cow position: chr28:5771107-5771368 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 103

Conread position: 166-429
Cow position: chr28:9390624-9390357 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 156

Conread position: 166-431
Cow position: chr28:23839950-23840212 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 135, 94

Conread position: 166-441
Cow position: chr28:30303452-30303183 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 96, 35

Conread position: 166-445
Cow position: chr28:4022123-4022409 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 20

Conread position: 166-445
Cow position: chr28:4880523-4880243 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 32, 100

Conread position: 166-445
Cow position: chr28:23480521-23480237 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 41, 89

Conread position: 166-447
Cow position: chr28:4282751-4282467 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 125

Conread position: 166-447
Cow position: chr28:7549321-7549035 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 100, 148

Conread position: 166-447
Cow position: chr28:17316601-17316888 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 115, 10

Conread position: 166-448
Cow position: chr28:5553185-5552914 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 18

Conread position: 166-448
Cow position: chr28:5792443-5792732 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 35, 96

Conread position: 166-448
Cow position: chr28:12946685-12946973 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 36

Conread position: 166-448
Cow position: chr28:17287965-17288240 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 212
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 35, 93

Conread position: 166-448
Cow position: chr28:20313016-20313301 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 66

Conread position: 166-448
Cow position: chr28:21380622-21380905 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 115, 26

Conread position: 167-448
Cow position: chr28:21502137-21502416 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 117

Conread position: 168-395
Cow position: chr28:25701115-25700901 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 133, 33

Conread position: 170-448
Cow position: chr28:16085070-16085349 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 9

Conread position: 170-448
Cow position: chr28:33051765-33052060 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 158

Conread position: 171-448
Cow position: chr28:4057732-4058006 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 70

Conread position: 171-448
Cow position: chr28:34878227-34877943 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 269

Conread position: 172-396
Cow position: chr28:16215144-16214931 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 158, 28

Conread position: 172-448
Cow position: chr28:1837743-1838017 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 26

Conread position: 172-448
Cow position: chr28:6059726-6059446 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 25, 184

Conread position: 172-448
Cow position: chr28:25727128-25727400 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 86, 26

Conread position: 173-447
Cow position: chr28:7228635-7228362 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 89, 28

Conread position: 173-447
Cow position: chr28:28766162-28765880 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 268

Conread position: 176-446
Cow position: chr28:15263974-15263692 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 21, 272

Conread position: 176-448
Cow position: chr28:21354975-21355255 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 212
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 20, 82

Conread position: 181-442
Cow position: chr28:24343125-24343389 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 19

Conread position: 187-448
Cow position: chr28:18354556-18354304 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 70

Conread position: 188-443
Cow position: chr28:9285615-9285351 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 136

Conread position: 189-446
Cow position: chr28:10606854-10606605 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 141, 11

Conread position: 195-442
Cow position: chr28:19394401-19394637 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 65

Conread position: 195-448
Cow position: chr28:5144752-5144497 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 39, 74

Conread position: 195-448
Cow position: chr28:9099705-9099960 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 107

Conread position: 201-446
Cow position: chr28:11818184-11817945 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 61, 93

Conread position: 205-441
Cow position: chr28:10478562-10478326 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 55

Conread position: 219-443
Cow position: chr28:22739595-22739811 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 30

Conread position: 230-447
Cow position: chr28:4881440-4881217 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 31

Conread position: 233-443
Cow position: chr28:26982938-26982719 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 176

Conread position: 234-448
Cow position: chr28:18186354-18186580 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 86

Conread position: 237-445
Cow position: chr28:118243-118029 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 25, 86

Conread position: 238-415
Cow position: chr28:3105052-3105242 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 239-445
Cow position: chr28:19023947-19024166 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 206

Conread position: 239-448
Cow position: chr28:11866855-11866641 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 23, 85

Conread position: 239-448
Cow position: chr28:18760228-18760024 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 21

Conread position: 241-448
Cow position: chr28:2752684-2752470 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 56

Conread position: 247-448
Cow position: chr28:28903847-28903639 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 15

Conread position: 275-429
Cow position: chr28:1632805-1632646 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 35

Conread position: 275-448
Cow position: chr28:25728049-25728223 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 8

Conread position: 287-446
Cow position: chr28:27161468-27161304 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 14

Conread position: 293-448
Cow position: chr28:1538036-1538190 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 106

Conread position: 295-431
Cow position: chr28:5838407-5838547 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 108

Conread position: 299-446
Cow position: chr28:32174506-32174649 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 22

Conread position: 312-448
Cow position: chr28:19564342-19564204 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 47

Conread position: 328-445
Cow position: chr28:20968957-20968839 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 24, 105

Show alignments to all cow chromosomes.