Cow genome map


           Conread name:
           Ova1-OVRM10035D03
        

               Conread position:
               1-448
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 158
               

               Conread position:
               8-396
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               8-448
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 110
               

               Conread position:
               25-438
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 28
               

               Conread position:
               74-448
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               47, 21
               

               Conread position:
               99-446
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               125-448
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               130-448
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 160
               

               Conread position:
               132-448
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               34, 103
               

               Conread position:
               142-448
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               144-430
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               144-443
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 10
               

               Conread position:
               146-446
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 108
               

               Conread position:
               150-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               155-448
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               147, 19
               

               Conread position:
               157-448
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               157-448
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               158-448
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               45, 7
               

               Conread position:
               161-446
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               161-448
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               162-438
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               162-446
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               163-448
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               138, 65
               

               Conread position:
               163-448
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 13
               

               Conread position:
               164-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 96
               

               Conread position:
               165-436
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 86
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               31, 98
               

               Conread position:
               165-448
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               36, 98
               

               Conread position:
               166-315
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               166-427
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               30, 103
               

               Conread position:
               166-429
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 156
               

               Conread position:
               166-431
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               135, 94
               

               Conread position:
               166-441
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               96, 35
               

               Conread position:
               166-445
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               166-445
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               32, 100
               

               Conread position:
               166-445
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 89
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 125
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 148
               

               Conread position:
               166-447
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 10
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               35, 96
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 36
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               212
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 93
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 66
               

               Conread position:
               166-448
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               167-448
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 117
               

               Conread position:
               168-395
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               133, 33
               

               Conread position:
               170-448
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               170-448
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 158
               

               Conread position:
               171-448
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               171-448
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 269
               

               Conread position:
               172-396
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               158, 28
               

               Conread position:
               172-448
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               90, 26
               

               Conread position:
               172-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               25, 184
               

               Conread position:
               172-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               173-447
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               173-447
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               28, 268
               

               Conread position:
               176-446
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               21, 272
               

               Conread position:
               176-448
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               181-442
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               81, 19
               

               Conread position:
               187-448
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               114, 70
               

               Conread position:
               188-443
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               189-446
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               141, 11
               

               Conread position:
               195-442
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               135, 65
               

               Conread position:
               195-448
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               195-448
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 107
               

               Conread position:
               201-446
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               61, 93
               

               Conread position:
               205-441
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               83, 55
               

               Conread position:
               219-443
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               230-447
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               233-443
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 176
               

               Conread position:
               234-448
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               24, 86
               

               Conread position:
               237-445
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               238-415
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               239-445
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 206
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               239-448
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               241-448
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               247-448
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               275-429
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               55, 35
               

               Conread position:
               275-448
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               287-446
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               293-448
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 106
               

               Conread position:
               295-431
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 108
               

               Conread position:
               299-446
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 22
               

               Conread position:
               312-448
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 47
               

               Conread position:
               328-445
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 105
               
Show alignments to all cow chromosomes.