Cow genome map

Conread name: Ova1-OVRM10035D03

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-136
Cow position:
Alignm length: 136
Alignm identity: 113
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 1-172
Cow position:
Alignm length: 173
Alignm identity: 140
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 10, 26

Conread position: 3-448
Cow position:
Alignm length: 471
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 14

Conread position: 3-448
Cow position:
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 152

Conread position: 3-448
Cow position:
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 130

Conread position: 4-406
Cow position:
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 130

Conread position: 6-448
Cow position:
Alignm length: 452
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 126

Conread position: 6-448
Cow position:
Alignm length: 457
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 7-446
Cow position:
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 91

Conread position: 7-448
Cow position:
Alignm length: 450
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 120

Conread position: 7-448
Cow position:
Alignm length: 454
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 7-448
Cow position:
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 35

Conread position: 8-448
Cow position:
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 24

Conread position: 12-426
Cow position:
Alignm length: 424
Alignm identity: 287
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 17, 28

Conread position: 20-396
Cow position:
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 49

Conread position: 77-448
Cow position:
Alignm length: 378
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 45

Conread position: 92-448
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 329

Conread position: 95-448
Cow position:
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 126

Conread position: 112-444
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 19

Conread position: 112-448
Cow position:
Alignm length: 352
Alignm identity: 234
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 19

Conread position: 123-447
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 131

Conread position: 125-448
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 146

Conread position: 131-448
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 66, 45

Conread position: 131-448
Cow position:
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 96

Conread position: 131-448
Cow position:
Alignm length: 329
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 130

Conread position: 132-404
Cow position:
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 35

Conread position: 134-447
Cow position:
Alignm length: 326
Alignm identity: 220
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 75, 31

Conread position: 138-344
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 124, 0

Conread position: 138-448
Cow position:
Alignm length: 331
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 20, 12

Conread position: 140-448
Cow position:
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 12

Conread position: 140-448
Cow position:
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 146

Conread position: 141-402
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 34

Conread position: 144-448
Cow position:
Alignm length: 318
Alignm identity: 228
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 8

Conread position: 146-442
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 51, 28

Conread position: 151-431
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 51

Conread position: 152-448
Cow position:
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 293

Conread position: 153-448
Cow position:
Alignm length: 300
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 43, 24

Conread position: 160-446
Cow position:
Alignm length: 294
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 14

Conread position: 160-448
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 103

Conread position: 161-431
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 163

Conread position: 161-446
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 40, 26

Conread position: 161-448
Cow position:
Alignm length: 308
Alignm identity: 219
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 98

Conread position: 162-447
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 8

Conread position: 162-448
Cow position:
Alignm length: 297
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 39, 12

Conread position: 163-407
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 123

Conread position: 163-431
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 39, 161

Conread position: 163-448
Cow position:
Alignm length: 317
Alignm identity: 230
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 38, 184

Conread position: 165-365
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 97, 124

Conread position: 165-446
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 105, 20

Conread position: 165-448
Cow position:
Alignm length: 291
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 165-448
Cow position:
Alignm length: 294
Alignm identity: 209
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 37, 52

Conread position: 166-392
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 158

Conread position: 166-396
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 35

Conread position: 166-418
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 103

Conread position: 166-429
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 78

Conread position: 166-436
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 135, 26

Conread position: 166-437
Cow position:
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 103

Conread position: 166-442
Cow position:
Alignm length: 288
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 94, 124

Conread position: 166-443
Cow position:
Alignm length: 284
Alignm identity: 191
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 96, 36

Conread position: 166-447
Cow position:
Alignm length: 308
Alignm identity: 226
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 166-448
Cow position:
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 162

Conread position: 166-448
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 96, 25

Conread position: 166-448
Cow position:
Alignm length: 300
Alignm identity: 220
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 30, 43

Conread position: 166-448
Cow position:
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 15

Conread position: 166-448
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 35, 159

Conread position: 167-392
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 104

Conread position: 167-427
Cow position:
Alignm length: 274
Alignm identity: 193
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 243

Conread position: 168-427
Cow position:
Alignm length: 269
Alignm identity: 203
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 32, 92

Conread position: 169-447
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 66

Conread position: 169-448
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 28, 155

Conread position: 170-438
Cow position:
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 123

Conread position: 172-393
Cow position:
Alignm length: 227
Alignm identity: 181
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 24, 89

Conread position: 172-399
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 55

Conread position: 172-430
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 29, 116

Conread position: 172-448
Cow position:
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 89

Conread position: 172-448
Cow position:
Alignm length: 288
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 173-448
Cow position:
Alignm length: 280
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 59

Conread position: 176-408
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 20

Conread position: 176-440
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 24

Conread position: 176-444
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 85

Conread position: 176-445
Cow position:
Alignm length: 282
Alignm identity: 207
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 177

Conread position: 176-445
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 86, 25

Conread position: 176-446
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 85

Conread position: 176-448
Cow position:
Alignm length: 286
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 85

Conread position: 176-448
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 25, 129

Conread position: 178-445
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 51

Conread position: 178-448
Cow position:
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 55

Conread position: 179-447
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 37

Conread position: 179-448
Cow position:
Alignm length: 277
Alignm identity: 201
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 12

Conread position: 179-448
Cow position:
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 24, 75

Conread position: 181-448
Cow position:
Alignm length: 275
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 87

Conread position: 182-448
Cow position:
Alignm length: 278
Alignm identity: 202
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 19, 79

Conread position: 187-448
Cow position:
Alignm length: 274
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 102

Conread position: 195-448
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 67, 88

Conread position: 195-448
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 95

Conread position: 196-395
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 106, 62

Conread position: 196-448
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 105, 64

Conread position: 196-448
Cow position:
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 134, 53

Conread position: 199-442
Cow position:
Alignm length: 252
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 61

Conread position: 203-446
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 122

Conread position: 211-448
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 51, 76

Conread position: 216-431
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 107

Conread position: 218-441
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 73

Conread position: 218-446
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 44, 76

Conread position: 223-448
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 37

Conread position: 223-448
Cow position:
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 81

Conread position: 223-448
Cow position:
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 61

Conread position: 227-448
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 41, 178

Conread position: 229-447
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 11

Conread position: 230-448
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 38

Conread position: 232-429
Cow position:
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 56

Conread position: 232-448
Cow position:
Alignm length: 225
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 62

Conread position: 234-446
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 81

Conread position: 241-439
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 203

Conread position: 241-448
Cow position:
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 19

Conread position: 244-445
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 76

Conread position: 250-445
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 51, 71

Conread position: 269-448
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 15

Conread position: 275-446
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 275-447
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 46

Conread position: 275-448
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 26

Conread position: 276-446
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 26, 44

Conread position: 279-436
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 24, 42

Conread position: 287-446
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 34

Conread position: 287-446
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 14

Conread position: 292-448
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 9, 147

Conread position: 295-448
Cow position:
Alignm length: 162
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 6, 145

Conread position: 300-448
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 20

Conread position: 301-448
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 19

Conread position: 305-448
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 65

Conread position: 313-448
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 121

Show alignments to all cow chromosomes.