Cow genome map
| Conread name: | Ova1-OVRM10035D03 |
| Conread position: | 1-136 |
| Cow position: | chr5:46023549-46023415 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-136 |
| Cow position: | chr5:46080627-46080493 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-136 |
| Cow position: | chr5:46130151-46130017 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-172 |
| Cow position: | chr5:13718334-13718167 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 26 |
| Conread position: | 3-448 |
| Cow position: | chr5:3639892-3639442 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 14 |
| Conread position: | 3-448 |
| Cow position: | chr5:4032378-4031944 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 152 |
| Conread position: | 3-448 |
| Cow position: | chr5:34115277-34115698 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 130 |
| Conread position: | 4-406 |
| Cow position: | chr5:40357256-40356863 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 130 |
| Conread position: | 6-448 |
| Cow position: | chr5:51999826-52000268 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 126 |
| Conread position: | 6-448 |
| Cow position: | chr5:58145004-58144556 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 7-446 |
| Cow position: | chr5:2500559-2500136 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 91 |
| Conread position: | 7-448 |
| Cow position: | chr5:31918255-31918688 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 7-448 |
| Cow position: | chr5:34300527-34300964 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 7-448 |
| Cow position: | chr5:54310963-54311381 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 35 |
| Conread position: | 8-448 |
| Cow position: | chr5:63987833-63987400 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 24 |
| Conread position: | 12-426 |
| Cow position: | chr5:39333920-39333515 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 20-396 |
| Cow position: | chr5:32963998-32963638 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 49 |
| Conread position: | 77-448 |
| Cow position: | chr5:11668495-11668140 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 45 |
| Conread position: | 92-448 |
| Cow position: | chr5:458157-458534 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 329 |
| Conread position: | 95-448 |
| Cow position: | chr5:8024511-8024148 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 126 |
| Conread position: | 112-444 |
| Cow position: | chr5:52165473-52165136 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 19 |
| Conread position: | 112-448 |
| Cow position: | chr5:41546184-41545848 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 19 |
| Conread position: | 123-447 |
| Cow position: | chr5:32697095-32696778 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 131 |
| Conread position: | 125-448 |
| Cow position: | chr5:37646832-37646498 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 146 |
| Conread position: | 131-448 |
| Cow position: | chr5:1779534-1779238 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 131-448 |
| Cow position: | chr5:49362272-49361947 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 131-448 |
| Cow position: | chr5:54350635-54350316 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 132-404 |
| Cow position: | chr5:45226098-45225821 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 35 |
| Conread position: | 134-447 |
| Cow position: | chr5:40711712-40711391 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 138-344 |
| Cow position: | chr5:2851047-2851257 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 138-448 |
| Cow position: | chr5:15478847-15479171 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 140-448 |
| Cow position: | chr5:28224194-28224498 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 12 |
| Conread position: | 140-448 |
| Cow position: | chr5:58855837-58856148 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 146 |
| Conread position: | 141-402 |
| Cow position: | chr5:34463849-34463585 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 144-448 |
| Cow position: | chr5:54713999-54713686 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 146-442 |
| Cow position: | chr5:54064522-54064815 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 51, 28 |
| Conread position: | 151-431 |
| Cow position: | chr5:30639105-30638834 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 152-448 |
| Cow position: | chr5:49685534-49685226 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 293 |
| Conread position: | 153-448 |
| Cow position: | chr5:53842041-53842326 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 160-446 |
| Cow position: | chr5:16184846-16185131 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 160-448 |
| Cow position: | chr5:52645323-52645035 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 103 |
| Conread position: | 161-431 |
| Cow position: | chr5:28927837-28927557 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 163 |
| Conread position: | 161-446 |
| Cow position: | chr5:4617133-4617411 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 161-448 |
| Cow position: | chr5:18090483-18090783 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 40, 98 |
| Conread position: | 162-447 |
| Cow position: | chr5:360184-359895 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 113, 8 |
| Conread position: | 162-448 |
| Cow position: | chr5:16894017-16893726 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 163-407 |
| Cow position: | chr5:74858331-74858576 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 33, 123 |
| Conread position: | 163-431 |
| Cow position: | chr5:64392912-64393185 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 39, 161 |
| Conread position: | 163-448 |
| Cow position: | chr5:66972160-66972474 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 38, 184 |
| Conread position: | 165-365 |
| Cow position: | chr5:70102048-70101845 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 97, 124 |
| Conread position: | 165-446 |
| Cow position: | chr5:30844872-30845156 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 165-448 |
| Cow position: | chr5:9090263-9089978 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 158 |
| Conread position: | 165-448 |
| Cow position: | chr5:34887438-34887150 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 37, 52 |
| Conread position: | 166-392 |
| Cow position: | chr5:30816476-30816708 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 158 |
| Conread position: | 166-396 |
| Cow position: | chr5:56433562-56433797 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 35 |
| Conread position: | 166-418 |
| Cow position: | chr5:62173434-62173690 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 103 |
| Conread position: | 166-429 |
| Cow position: | chr5:43858667-43858410 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 35, 78 |
| Conread position: | 166-436 |
| Cow position: | chr5:6130117-6130387 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 166-437 |
| Cow position: | chr5:43474608-43474879 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 103 |
| Conread position: | 166-442 |
| Cow position: | chr5:43923388-43923113 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 166-443 |
| Cow position: | chr5:63647706-63647435 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 96, 36 |
| Conread position: | 166-447 |
| Cow position: | chr5:55756681-55756374 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 166-448 |
| Cow position: | chr5:14550825-14550539 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 162 |
| Conread position: | 166-448 |
| Cow position: | chr5:29771279-29771573 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 25 |
| Conread position: | 166-448 |
| Cow position: | chr5:42845839-42845548 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 166-448 |
| Cow position: | chr5:50637592-50637870 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 15 |
| Conread position: | 166-448 |
| Cow position: | chr5:64321509-64321799 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 167-392 |
| Cow position: | chr5:60519928-60520151 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 104 |
| Conread position: | 167-427 |
| Cow position: | chr5:58460643-58460372 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 243 |
| Conread position: | 168-427 |
| Cow position: | chr5:50950316-50950579 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 32, 92 |
| Conread position: | 169-447 |
| Cow position: | chr5:29353365-29353081 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 118, 66 |
| Conread position: | 169-448 |
| Cow position: | chr5:17063330-17063041 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 170-438 |
| Cow position: | chr5:45036785-45037049 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 123 |
| Conread position: | 172-393 |
| Cow position: | chr5:3491968-3492185 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 172-399 |
| Cow position: | chr5:65933161-65932932 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 55 |
| Conread position: | 172-430 |
| Cow position: | chr5:34442025-34441760 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 116 |
| Conread position: | 172-448 |
| Cow position: | chr5:36854979-36855249 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 172-448 |
| Cow position: | chr5:61839955-61840233 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 173-448 |
| Cow position: | chr5:20127822-20128097 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 59 |
| Conread position: | 176-408 |
| Cow position: | chr5:55821139-55821380 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 20 |
| Conread position: | 176-440 |
| Cow position: | chr5:46122578-46122316 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 86, 24 |
| Conread position: | 176-444 |
| Cow position: | chr5:4218648-4218908 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 176-445 |
| Cow position: | chr5:14420574-14420297 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 25, 177 |
| Conread position: | 176-445 |
| Cow position: | chr5:20344940-20345204 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 25 |
| Conread position: | 176-446 |
| Cow position: | chr5:36868516-36868780 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 176-448 |
| Cow position: | chr5:3771617-3771893 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 216 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 176-448 |
| Cow position: | chr5:5111306-5111029 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 25, 129 |
| Conread position: | 178-445 |
| Cow position: | chr5:51490981-51490722 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 51 |
| Conread position: | 178-448 |
| Cow position: | chr5:56820487-56820216 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 179-447 |
| Cow position: | chr5:7723446-7723709 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 83, 37 |
| Conread position: | 179-448 |
| Cow position: | chr5:26262896-26262629 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 83, 12 |
| Conread position: | 179-448 |
| Cow position: | chr5:55068490-55068751 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 181-448 |
| Cow position: | chr5:72564538-72564809 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 87 |
| Conread position: | 182-448 |
| Cow position: | chr5:65752633-65752905 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 19, 79 |
| Conread position: | 187-448 |
| Cow position: | chr5:62142452-62142721 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 195-448 |
| Cow position: | chr5:18898774-18899021 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 67, 88 |
| Conread position: | 195-448 |
| Cow position: | chr5:40039980-40039723 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 71, 95 |
| Conread position: | 196-395 |
| Cow position: | chr5:57271473-57271273 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 196-448 |
| Cow position: | chr5:7140313-7140061 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 105, 64 |
| Conread position: | 196-448 |
| Cow position: | chr5:64758972-64758722 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 134, 53 |
| Conread position: | 199-442 |
| Cow position: | chr5:8994771-8994526 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 203-446 |
| Cow position: | chr5:9390334-9390596 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 211-448 |
| Cow position: | chr5:22643411-22643181 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 216-431 |
| Cow position: | chr5:4220792-4221009 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 218-441 |
| Cow position: | chr5:17644842-17644614 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 44, 73 |
| Conread position: | 218-446 |
| Cow position: | chr5:29061111-29060884 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 223-448 |
| Cow position: | chr5:5855698-5855903 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 223-448 |
| Cow position: | chr5:47323269-47323507 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 81 |
| Conread position: | 223-448 |
| Cow position: | chr5:55928761-55928989 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 39, 61 |
| Conread position: | 227-448 |
| Cow position: | chr5:51935005-51935235 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 41, 178 |
| Conread position: | 229-447 |
| Cow position: | chr5:43816786-43816559 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 230-448 |
| Cow position: | chr5:29980160-29979937 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 51, 38 |
| Conread position: | 232-429 |
| Cow position: | chr5:59115208-59115413 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 232-448 |
| Cow position: | chr5:41452839-41452620 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 62 |
| Conread position: | 234-446 |
| Cow position: | chr5:55955735-55955951 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 241-439 |
| Cow position: | chr5:62985353-62985562 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 203 |
| Conread position: | 241-448 |
| Cow position: | chr5:16214524-16214732 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 244-445 |
| Cow position: | chr5:71579013-71579218 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 250-445 |
| Cow position: | chr5:35247265-35247070 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 71 |
| Conread position: | 269-448 |
| Cow position: | chr5:45273635-45273456 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 275-446 |
| Cow position: | chr5:64140400-64140580 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 275-447 |
| Cow position: | chr5:54768040-54767865 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 275-448 |
| Cow position: | chr5:63427136-63426960 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 276-446 |
| Cow position: | chr5:7921529-7921361 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 26, 44 |
| Conread position: | 279-436 |
| Cow position: | chr5:18289003-18289164 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 42 |
| Conread position: | 287-446 |
| Cow position: | chr5:16179643-16179480 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 34 |
| Conread position: | 287-446 |
| Cow position: | chr5:60747394-60747233 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 292-448 |
| Cow position: | chr5:13717684-13717524 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 9, 147 |
| Conread position: | 295-448 |
| Cow position: | chr5:23678814-23678654 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 6, 145 |
| Conread position: | 300-448 |
| Cow position: | chr5:56635796-56635940 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 301-448 |
| Cow position: | chr5:60448112-60448261 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 305-448 |
| Cow position: | chr5:55019194-55019337 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 313-448 |
| Cow position: | chr5:50575692-50575829 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 121 |
Show alignments to all cow chromosomes.