Cow genome map
| Conread name: | Ova1-OVRM10035D03 |
| Conread position: | 1-447 |
| Cow position: | chrX:9854907-9855343 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 159 |
| Conread position: | 3-448 |
| Cow position: | chrX:16416097-16416555 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 219 |
| Conread position: | 3-448 |
| Cow position: | chrX:27679992-27680444 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 4-396 |
| Cow position: | chrX:42282035-42282422 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 101 |
| Conread position: | 4-445 |
| Cow position: | chrX:38840488-38840927 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 158 |
| Conread position: | 4-447 |
| Cow position: | chrX:17631198-17630758 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 146 |
| Conread position: | 7-446 |
| Cow position: | chrX:10831877-10831446 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 137 |
| Conread position: | 7-448 |
| Cow position: | chrX:39558732-39558302 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 142 |
| Conread position: | 7-448 |
| Cow position: | chrX:40035835-40035396 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 9 |
| Conread position: | 7-448 |
| Cow position: | chrX:41198721-41199154 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 121 |
| Conread position: | 8-448 |
| Cow position: | chrX:11589986-11589542 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 28 |
| Conread position: | 8-448 |
| Cow position: | chrX:34663224-34662800 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 11-445 |
| Cow position: | chrX:44961352-44961794 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 285 |
| Conread position: | 11-448 |
| Cow position: | chrX:38549048-38549491 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 71 |
| Conread position: | 12-448 |
| Cow position: | chrX:32419828-32420258 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 115 |
| Conread position: | 12-448 |
| Cow position: | chrX:37489357-37489765 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 18-448 |
| Cow position: | chrX:1514781-1514366 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 149 |
| Conread position: | 25-410 |
| Cow position: | chrX:35284236-35284628 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 25-445 |
| Cow position: | chrX:32623218-32623614 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 176, 92 |
| Conread position: | 25-448 |
| Cow position: | chrX:42492877-42492477 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 115 |
| Conread position: | 30-448 |
| Cow position: | chrX:11455411-11454996 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 301 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 274, 100 |
| Conread position: | 57-447 |
| Cow position: | chrX:23514354-23513970 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 66 |
| Conread position: | 70-369 |
| Cow position: | chrX:2206887-2206583 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 87-444 |
| Cow position: | chrX:37119280-37119638 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 167 |
| Conread position: | 100-448 |
| Cow position: | chrX:44396709-44397061 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 29, 226 |
| Conread position: | 104-448 |
| Cow position: | chrX:41167263-41166916 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 62 |
| Conread position: | 106-448 |
| Cow position: | chrX:20751970-20752301 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 17 |
| Conread position: | 123-391 |
| Cow position: | chrX:2029109-2029381 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 130-445 |
| Cow position: | chrX:11718056-11717740 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 131-447 |
| Cow position: | chrX:21672278-21672599 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 194 |
| Conread position: | 132-446 |
| Cow position: | chrX:27394286-27393982 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 132-447 |
| Cow position: | chrX:10412254-10411941 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 20 |
| Conread position: | 132-448 |
| Cow position: | chrX:26625949-26625625 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 195 |
| Conread position: | 133-448 |
| Cow position: | chrX:17662867-17662549 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 134-279 |
| Cow position: | chrX:616671-616530 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 134-437 |
| Cow position: | chrX:30833107-30832817 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 154, 15 |
| Conread position: | 134-448 |
| Cow position: | chrX:43567669-43567965 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 127 |
| Conread position: | 136-440 |
| Cow position: | chrX:41743645-41743952 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 140-443 |
| Cow position: | chrX:30543542-30543243 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 143-448 |
| Cow position: | chrX:15814839-15815130 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 53, 23 |
| Conread position: | 145-405 |
| Cow position: | chrX:46315643-46315374 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 61 |
| Conread position: | 146-448 |
| Cow position: | chrX:43527243-43527554 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 142 |
| Conread position: | 149-448 |
| Cow position: | chrX:16762515-16762817 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 9 |
| Conread position: | 151-401 |
| Cow position: | chrX:877274-877035 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 152-428 |
| Cow position: | chrX:34441703-34441422 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 72 |
| Conread position: | 156-439 |
| Cow position: | chrX:45113380-45113654 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 161-446 |
| Cow position: | chrX:40481114-40480825 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 163-436 |
| Cow position: | chrX:38439232-38439515 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 163-448 |
| Cow position: | chrX:878612-878334 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 99, 65 |
| Conread position: | 163-448 |
| Cow position: | chrX:15007392-15007103 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 163-448 |
| Cow position: | chrX:27432160-27431872 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 163-448 |
| Cow position: | chrX:42994373-42994659 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 163-448 |
| Cow position: | chrX:48243693-48243420 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 86 |
| Conread position: | 164-442 |
| Cow position: | chrX:12115799-12116087 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 164-448 |
| Cow position: | chrX:37843478-37843765 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 10, 107 |
| Conread position: | 165-437 |
| Cow position: | chrX:14973971-14973706 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 28 |
| Conread position: | 165-445 |
| Cow position: | chrX:38936462-38936743 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 97, 122 |
| Conread position: | 165-445 |
| Cow position: | chrX:40647739-40648029 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 163 |
| Conread position: | 165-446 |
| Cow position: | chrX:8925464-8925743 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 165-446 |
| Cow position: | chrX:41238602-41238310 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 123, 36 |
| Conread position: | 165-448 |
| Cow position: | chrX:917608-917322 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 165-448 |
| Cow position: | chrX:18695160-18694881 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 165-448 |
| Cow position: | chrX:28845607-28845879 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 83 |
| Conread position: | 165-448 |
| Cow position: | chrX:34502681-34502966 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 36 |
| Conread position: | 166-396 |
| Cow position: | chrX:35041981-35042219 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 35, 160 |
| Conread position: | 166-402 |
| Cow position: | chrX:38227328-38227093 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 30, 95 |
| Conread position: | 166-441 |
| Cow position: | chrX:3653525-3653798 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 95 |
| Conread position: | 166-442 |
| Cow position: | chrX:7718615-7718889 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 166-446 |
| Cow position: | chrX:34990803-34991080 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 166-447 |
| Cow position: | chrX:19188698-19188976 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 127 |
| Conread position: | 166-447 |
| Cow position: | chrX:26492764-26493051 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 162 |
| Conread position: | 166-447 |
| Cow position: | chrX:34401759-34402045 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 166-447 |
| Cow position: | chrX:44192681-44192402 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 68 |
| Conread position: | 166-448 |
| Cow position: | chrX:161190-161458 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 30, 52 |
| Conread position: | 166-448 |
| Cow position: | chrX:1616289-1615995 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 166-448 |
| Cow position: | chrX:5872075-5872363 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 209 |
| Conread position: | 166-448 |
| Cow position: | chrX:8797010-8797302 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 166-448 |
| Cow position: | chrX:9360645-9360933 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 82 |
| Conread position: | 166-448 |
| Cow position: | chrX:15147424-15147147 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 69 |
| Conread position: | 166-448 |
| Cow position: | chrX:20340129-20339846 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 38, 92 |
| Conread position: | 166-448 |
| Cow position: | chrX:27446450-27446732 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 35, 241 |
| Conread position: | 166-448 |
| Cow position: | chrX:28847117-28846847 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 35, 106 |
| Conread position: | 166-448 |
| Cow position: | chrX:29289338-29289624 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 35, 159 |
| Conread position: | 166-448 |
| Cow position: | chrX:34238483-34238765 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 96, 119 |
| Conread position: | 166-448 |
| Cow position: | chrX:34754430-34754146 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 36, 159 |
| Conread position: | 166-448 |
| Cow position: | chrX:36778168-36778454 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 151 |
| Conread position: | 166-448 |
| Cow position: | chrX:45598842-45598557 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 30, 136 |
| Conread position: | 167-447 |
| Cow position: | chrX:7721748-7722037 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 167-448 |
| Cow position: | chrX:6690485-6690214 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 94 |
| Conread position: | 167-448 |
| Cow position: | chrX:42874741-42875029 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 273 |
| Conread position: | 168-448 |
| Cow position: | chrX:4044086-4043818 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 92 |
| Conread position: | 168-448 |
| Cow position: | chrX:12249569-12249857 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 30, 79 |
| Conread position: | 170-445 |
| Cow position: | chrX:28134112-28134383 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 209 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 117, 90 |
| Conread position: | 170-448 |
| Cow position: | chrX:33639737-33640021 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 118 |
| Conread position: | 172-438 |
| Cow position: | chrX:38072003-38071728 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 30, 155 |
| Conread position: | 172-440 |
| Cow position: | chrX:23497895-23497628 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 28 |
| Conread position: | 172-447 |
| Cow position: | chrX:12309621-12309341 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 143 |
| Conread position: | 172-448 |
| Cow position: | chrX:5638401-5638123 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 172-448 |
| Cow position: | chrX:6278738-6278452 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 23, 259 |
| Conread position: | 172-448 |
| Cow position: | chrX:7351067-7351346 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 172-448 |
| Cow position: | chrX:25816128-25815855 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 172-448 |
| Cow position: | chrX:46532741-46532449 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 277 |
| Conread position: | 172-448 |
| Cow position: | chrX:47481566-47481846 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 5, 232 |
| Conread position: | 173-444 |
| Cow position: | chrX:14900952-14900688 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 86 |
| Conread position: | 173-445 |
| Cow position: | chrX:15996923-15997206 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 135 |
| Conread position: | 173-448 |
| Cow position: | chrX:5017639-5017365 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 87 |
| Conread position: | 173-448 |
| Cow position: | chrX:5900226-5900512 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 36, 239 |
| Conread position: | 173-448 |
| Cow position: | chrX:41122841-41123107 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 128, 101 |
| Conread position: | 176-431 |
| Cow position: | chrX:37048809-37048551 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 23, 152 |
| Conread position: | 176-444 |
| Cow position: | chrX:45436981-45437255 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 84, 25 |
| Conread position: | 176-448 |
| Cow position: | chrX:16790065-16789810 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 125, 84 |
| Conread position: | 176-448 |
| Cow position: | chrX:34565069-34565332 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 176-448 |
| Cow position: | chrX:42247412-42247136 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 85 |
| Conread position: | 177-448 |
| Cow position: | chrX:35681118-35681388 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 72 |
| Conread position: | 177-448 |
| Cow position: | chrX:44873778-44873511 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 86 |
| Conread position: | 177-448 |
| Cow position: | chrX:47191626-47191361 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 19, 84 |
| Conread position: | 178-448 |
| Cow position: | chrX:13382098-13382377 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 23, 148 |
| Conread position: | 181-448 |
| Cow position: | chrX:6488363-6488625 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 182-432 |
| Cow position: | chrX:1503117-1503370 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 182-448 |
| Cow position: | chrX:46073044-46072771 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 19, 83 |
| Conread position: | 183-448 |
| Cow position: | chrX:11633457-11633728 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 184-448 |
| Cow position: | chrX:29602053-29601782 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 187-448 |
| Cow position: | chrX:29120841-29121093 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 114, 14 |
| Conread position: | 188-448 |
| Cow position: | chrX:40567383-40567643 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 170 |
| Conread position: | 196-431 |
| Cow position: | chrX:26285772-26286011 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 196-448 |
| Cow position: | chrX:45993013-45993274 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 197-448 |
| Cow position: | chrX:46587611-46587868 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 91 |
| Conread position: | 200-431 |
| Cow position: | chrX:17908487-17908258 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 73 |
| Conread position: | 202-438 |
| Cow position: | chrX:1499468-1499701 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 58 |
| Conread position: | 203-448 |
| Cow position: | chrX:43780053-43779801 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 206-448 |
| Cow position: | chrX:36961438-36961687 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 207 |
| Conread position: | 211-447 |
| Cow position: | chrX:10394288-10394059 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 216-445 |
| Cow position: | chrX:23785466-23785690 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 46, 140 |
| Conread position: | 216-447 |
| Cow position: | chrX:42235721-42235479 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 51 |
| Conread position: | 216-448 |
| Cow position: | chrX:43730402-43730178 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 114, 44 |
| Conread position: | 217-448 |
| Cow position: | chrX:48035241-48035471 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 107 |
| Conread position: | 225-447 |
| Cow position: | chrX:4279293-4279073 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 228-445 |
| Cow position: | chrX:29563546-29563326 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 228-446 |
| Cow position: | chrX:47186496-47186280 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 57 |
| Conread position: | 230-444 |
| Cow position: | chrX:22387421-22387204 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 28, 95 |
| Conread position: | 231-431 |
| Cow position: | chrX:31252245-31252447 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 232-396 |
| Cow position: | chrX:37955666-37955825 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 232-448 |
| Cow position: | chrX:32820857-32821075 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 30, 53 |
| Conread position: | 235-438 |
| Cow position: | chrX:14003813-14003610 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 238-446 |
| Cow position: | chrX:41992207-41992002 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 240-448 |
| Cow position: | chrX:41068564-41068771 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 41 |
| Conread position: | 245-448 |
| Cow position: | chrX:36355957-36356158 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 246-448 |
| Cow position: | chrX:27227966-27228172 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 249-438 |
| Cow position: | chrX:35969237-35969050 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 257-448 |
| Cow position: | chrX:38728590-38728780 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 64 |
| Conread position: | 262-448 |
| Cow position: | chrX:29680404-29680215 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 60 |
| Conread position: | 273-448 |
| Cow position: | chrX:7710674-7710493 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 28, 168 |
| Conread position: | 275-446 |
| Cow position: | chrX:45875262-45875436 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 161 |
| Conread position: | 275-448 |
| Cow position: | chrX:11614570-11614744 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 279-446 |
| Cow position: | chrX:41027032-41027203 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 40 |
| Conread position: | 279-448 |
| Cow position: | chrX:19003175-19003343 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 284-448 |
| Cow position: | chrX:27119579-27119743 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 287-448 |
| Cow position: | chrX:5679683-5679523 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 287-448 |
| Cow position: | chrX:9365792-9365630 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 290-416 |
| Cow position: | chrX:32747569-32747698 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 291-448 |
| Cow position: | chrX:38654543-38654384 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 293-448 |
| Cow position: | chrX:29194123-29194278 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 293-448 |
| Cow position: | chrX:29488112-29487962 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 293-448 |
| Cow position: | chrX:47209232-47209392 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 300-445 |
| Cow position: | chrX:35848458-35848607 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 301-446 |
| Cow position: | chrX:16348672-16348520 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 307-448 |
| Cow position: | chrX:20168461-20168604 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 13 |
Show alignments to all cow chromosomes.